RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ZFPM1Q8IX07 1006 aa14.69□□□□□ -0.06
LMX1B-201ENST00000355497 SPPL2BQ8TCT7 592 aa14.69□□□□□ -0.06
LMX1B-201ENST00000355497 SLC39A3Q9BRY0 314 aa14.69□□□□□ -0.06
LMX1B-201ENST00000355497 NMUR1Q9HB89 426 aa14.69□□□□□ -0.06
LMX1B-201ENST00000355497 SNTG1Q9NSN8 517 aa14.69□□□□□ -0.06
LMX1B-201ENST00000355497 FAM105AQ9NUU6 356 aa14.69□□□□□ -0.06
LMX1B-201ENST00000355497 FZD1Q9UP38 647 aa14.69□□□□□ -0.06
LMX1B-201ENST00000355497 TPST2O60704 377 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 PRAMEF1O95521 474 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 HNRNPH3P31942 346 aaKnown RBP14.68□□□□□ -0.06
LMX1B-201ENST00000355497 DACT2Q5SW24 774 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 ALG1LQ6GMV1 187 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 OGFOD2Q6N063 350 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 USP50Q70EL3 339 aaPredicted RBP14.68□□□□□ -0.06
LMX1B-201ENST00000355497 ZDHHC21Q8IVQ6 265 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 OR10A6Q8NH74 314 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 ALG3Q92685 438 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 GAL3ST4Q96RP7 486 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 COPS7AQ9UBW8 275 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 TMEM5Q9Y2B1 443 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 TACR2P21452 398 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 USF2Q15853 346 aaPredicted RBP14.68□□□□□ -0.06
LMX1B-201ENST00000355497 PRAMEF17Q5VTA0 474 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 SLC30A8Q8IWU4 369 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 PIWIL1Q96J94 861 aaKnown RBP14.68□□□□□ -0.06
LMX1B-201ENST00000355497 KXD1Q9BQD3 176 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 TLL2Q9Y6L7 1015 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 TTC34A8MYJ7 566 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 GNB5O14775 395 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 RENP00797 406 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 PRNPP04156 253 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 LINGO3P0C6S8 592 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 RYKP34925 604 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 OR1D2P34982 312 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 IDH3AP50213 366 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 TAF10Q12962 218 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 CHIT1Q13231 466 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 ZNF627Q7L945 461 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 CFAP206Q8IYR0 622 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 TAMM41Q96BW9 452 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 B3GNT5Q9BYG0 378 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 OR51V1Q9H2C8 321 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 MALT1Q9UDY8 824 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 PCDHGB7Q9Y5F8 929 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 TNS2Q63HR2 1409 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 DIP2AQ14689 1571 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 DAPL1A0PJW8 107 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 DPPA5A6NC42 116 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 ZSCAN5BA6NJL1 495 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 UBXN7O94888 489 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 PRAMEF12O95522 483 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 SPATA31D3P0C874 917 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 PUM1Q14671 1186 aaKnown RBP eCLIP14.68□□□□□ -0.06
LMX1B-201ENST00000355497 LCLAT1Q6UWP7 414 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 SPATA31D4Q6ZUB0 917 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 OR5K1Q8NHB7 308 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 IRGQQ8WZA9 623 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 RIT1Q92963 219 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 C12orf66Q96MD2 445 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 ZFP3Q96NJ6 502 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 PCDHB18PQ96TA0 734 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 TVP23BQ9NYZ1 205 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 DISP2A7MBM2 1401 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 TRBV23OR9-2A0A075B6M9 112 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 L7N2F9 121 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 PEX2P28328 305 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 OR3A3P47888 321 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 OR3A2P47893 321 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 GLUD2P49448 558 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 VAMP2P63027 116 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 DGLUCYQ7Z3D6 616 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 RBM23Q86U06 439 aaKnown RBP14.68□□□□□ -0.06
LMX1B-201ENST00000355497 RAB2BQ8WUD1 216 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 CCDC107Q8WV48 283 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 AZIN2Q96A70 460 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 SSU72Q9NP77 194 aaKnown RBP14.68□□□□□ -0.06
LMX1B-201ENST00000355497 NR2E3Q9Y5X4 410 aa14.68□□□□□ -0.06
LMX1B-201ENST00000355497 COL1A2P08123 1366 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 ZNF20P17024 532 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 FSHRP23945 695 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 DSC2Q02487 901 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 IL17AQ16552 155 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 PLPP4Q5VZY2 271 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 CPT1BQ92523 772 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 RBM18Q96H35 190 aaKnown RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 C8orf48Q96LL4 319 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 ROBO3Q96MS0 1386 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 SH3D21A4FU49 640 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 OR2AG2A6NM03 316 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 PIP5K1BO14986 540 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 RNASEH2AO75792 299 aaKnown RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 OR2B6P58173 313 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 MCCD1P59942 119 aaPredicted RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 CSTF1Q05048 431 aaKnown RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 DUSP4Q13115 394 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 MINDY4Q4G0A6 757 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 EEF1DP3Q658K8 133 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 GPR142Q7Z601 462 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 LDB1Q86U70 411 aaPredicted RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 ANKRD46Q86W74 232 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms