RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 AGTR2P50052 363 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 HK3P52790 923 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 ZNF235Q14590 738 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 INAQ16352 499 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 NKG7Q16617 165 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 ALFQ53S48 1182 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 OVOS1Q6IE37 1185 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 ENPP6Q6UWR7 440 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 CD300LGQ6UXG3 332 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 PIWIL3Q7Z3Z3 882 aaKnown RBP11.24□□□□□ -0.61
CAPN9-202ENST00000354537 GPR142Q7Z601 462 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 PLPP6Q8IY26 295 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 MICU2Q8IYU8 434 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 CDYL2Q8N8U2 506 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 ZFP90Q8TF47 636 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 TRIB2Q92519 343 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 SGCDQ92629 289 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 GTF2H4Q92759 462 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 KCNJ9Q92806 393 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 ZNF300Q96RE9 604 aaPredicted RBP11.24□□□□□ -0.61
CAPN9-202ENST00000354537 THG1LQ9NWX6 298 aaKnown RBP11.24□□□□□ -0.61
CAPN9-202ENST00000354537 SCN3BQ9NY72 215 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 CD274Q9NZQ7 290 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 DNMT3BQ9UBC3 853 aaKnown RBP11.24□□□□□ -0.61
CAPN9-202ENST00000354537 FAM50BQ9Y247 325 aa11.24□□□□□ -0.61
CAPN9-202ENST00000354537 MEIS3P2A8K0S8 358 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 BCKDKO14874 412 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 ARHGEF15O94989 841 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 NADKO95544 446 aaPredicted RBP11.23□□□□□ -0.61
CAPN9-202ENST00000354537 PABPC1P11940 636 aaKnown RBP11.23□□□□□ -0.61
CAPN9-202ENST00000354537 AGXTP21549 392 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 S100A1P23297 94 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 CPT1AP50416 773 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 PPP5CP53041 499 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 MRPS6P82932 125 aaKnown RBP11.23□□□□□ -0.61
CAPN9-202ENST00000354537 PTPRNQ16849 979 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 AP5B1Q2VPB7 878 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 ADPRMQ3LIE5 342 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 SHQ1Q6PI26 577 aaKnown RBP11.23□□□□□ -0.61
CAPN9-202ENST00000354537 SPESP1Q6UW49 350 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 IL27RAQ6UWB1 636 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 SCIMPQ6UWF3 145 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 AGMOQ6ZNB7 445 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 ADCK1Q86TW2 530 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 P2RY8Q86VZ1 359 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 CALHM3Q86XJ0 350 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 FBXO30Q8TB52 745 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 STARD8Q92502 1023 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 FAM162AQ96A26 154 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 CDCA5Q96FF9 252 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 FBXO44Q9H4M3 255 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 VAPAQ9P0L0 249 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 TMEFF2Q9UIK5 374 aaPredicted RBP11.23□□□□□ -0.61
CAPN9-202ENST00000354537 CCL27Q9Y4X3 112 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 A3GALT2U3KPV4 340 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 CASTOR2A6NHX0 329 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 CLDN24A6NM45 220 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 M0QZ92 97 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 SLC28A1O00337 649 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 HS6ST1O60243 411 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 NOBOXO60393 691 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 DFNA5O60443 496 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 ZNF623O75123 536 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 XYLBO75191 536 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 WDR47O94967 919 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 ANGPTL1O95841 491 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 OTCP00480 354 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 CAPN1P07384 714 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 SOX11P35716 441 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 MAGEA2P43356 314 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 PGFP49763 221 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 ST13P50502 369 aaKnown RBP11.23□□□□□ -0.61
CAPN9-202ENST00000354537 CSNK2BP67870 215 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 SLC35A2P78381 396 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 IFITM3Q01628 133 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 PTPRCAPQ14761 206 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 PON2Q15165 354 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 NR6A1Q15406 480 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 TRIP4Q15650 581 aaPredicted RBP11.23□□□□□ -0.61
CAPN9-202ENST00000354537 MAPKAPK3Q16644 382 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 NDUFA5Q16718 116 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 LDLRAP1Q5SW96 308 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 CAPN13Q6MZZ7 669 aaPredicted RBP11.23□□□□□ -0.61
CAPN9-202ENST00000354537 METTL2BQ6P1Q9 378 aaKnown RBP11.23□□□□□ -0.61
CAPN9-202ENST00000354537 BTLAQ7Z6A9 289 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 ELMOD1Q8N336 334 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 FAM86B1Q8N7N1 296 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 RHOXF1Q8NHV9 184 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 MCOLN3Q8TDD5 553 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 DACH2Q96NX9 599 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 THUMPD3Q9BV44 507 aaKnown RBP11.23□□□□□ -0.61
CAPN9-202ENST00000354537 ASPSCR1Q9BZE9 553 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 PDFQ9HBH1 243 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 EIF2B4Q9UI10 523 aaKnown RBP11.23□□□□□ -0.61
CAPN9-202ENST00000354537 ST3GAL5Q9UNP4 418 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 Q9Y3F1 56 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 PCDHGA10Q9Y5H3 936 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 TRPV2Q9Y5S1 764 aa11.23□□□□□ -0.61
CAPN9-202ENST00000354537 PTPRDP23468 1912 aa11.22□□□□□ -0.61
CAPN9-202ENST00000354537 TRBV5-3A0A0A0MS03 114 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms