RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 OTOAQ7RTW8 1153 aa13.64□□□□□ -0.23
SEC13-202ENST00000350697 SLC26A11Q86WA9 606 aa13.64□□□□□ -0.23
SEC13-202ENST00000350697 RBM12BQ8IXT5 1001 aaKnown RBP13.64□□□□□ -0.23
SEC13-202ENST00000350697 SPDYE1Q8NFV5 336 aaPredicted RBP13.64□□□□□ -0.23
SEC13-202ENST00000350697 KCNJ9Q92806 393 aa13.64□□□□□ -0.23
SEC13-202ENST00000350697 RMDN2Q96LZ7 410 aa13.64□□□□□ -0.23
SEC13-202ENST00000350697 C12orf66Q96MD2 445 aa13.64□□□□□ -0.23
SEC13-202ENST00000350697 INSM2Q96T92 566 aaPredicted RBP13.64□□□□□ -0.23
SEC13-202ENST00000350697 CCDC3Q9BQI4 270 aa13.64□□□□□ -0.23
SEC13-202ENST00000350697 LATS2Q9NRM7 1088 aa13.64□□□□□ -0.23
SEC13-202ENST00000350697 NINJ2Q9NZG7 142 aa13.64□□□□□ -0.23
SEC13-202ENST00000350697 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.64□□□□□ -0.23
SEC13-202ENST00000350697 RABGEF1Q9UJ41 708 aa13.64□□□□□ -0.23
SEC13-202ENST00000350697 CORO1CQ9ULV4 474 aaPredicted RBP13.64□□□□□ -0.23
SEC13-202ENST00000350697 HEBP2Q9Y5Z4 205 aa13.64□□□□□ -0.23
SEC13-202ENST00000350697 V9GYY5 206 aaPredicted RBP13.64□□□□□ -0.23
SEC13-202ENST00000350697 UNC13CQ8NB66 2214 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 KNTC1P50748 2209 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 FAM159BA6NKW6 160 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 MTHFD1P11586 935 aaKnown RBP13.63□□□□□ -0.23
SEC13-202ENST00000350697 PHBP35232 272 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 CSE1LP55060 971 aaKnown RBP13.63□□□□□ -0.23
SEC13-202ENST00000350697 ILF2Q12905 390 aaKnown RBP13.63□□□□□ -0.23
SEC13-202ENST00000350697 PLEKHS1Q5SXH7 462 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 N4BP2L1Q5TBK1 243 aaPredicted RBP13.63□□□□□ -0.23
SEC13-202ENST00000350697 SPRED1Q7Z699 444 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 PDZD3Q86UT5 571 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 SLC22A15Q8IZD6 547 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 WDR48Q8TAF3 677 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 ADAMTS14Q8WXS8 1223 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 SLC38A3Q99624 504 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 AARSD1Q9BTE6 412 aaKnown RBP13.63□□□□□ -0.23
SEC13-202ENST00000350697 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.63□□□□□ -0.23
SEC13-202ENST00000350697 ABCG4Q9H172 646 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 CDC42EP4Q9H3Q1 356 aaKnown RBP13.63□□□□□ -0.23
SEC13-202ENST00000350697 ANKZF1Q9H8Y5 726 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 UCK1Q9HA47 277 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 SLC40A1Q9NP59 571 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 SMYD2Q9NRG4 433 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 IMP3Q9NV31 184 aaKnown RBP13.63□□□□□ -0.23
SEC13-202ENST00000350697 CDYLQ9Y232 598 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 PSAT1Q9Y617 370 aa13.63□□□□□ -0.23
SEC13-202ENST00000350697 OPA1O60313 960 aa13.62□□□□□ -0.23
SEC13-202ENST00000350697 VPS26AO75436 327 aa13.62□□□□□ -0.23
SEC13-202ENST00000350697 SLCO2B1O94956 709 aa13.62□□□□□ -0.23
SEC13-202ENST00000350697 C1QAP02745 245 aa13.62□□□□□ -0.23
SEC13-202ENST00000350697 TNFRSF8P28908 595 aa13.62□□□□□ -0.23
SEC13-202ENST00000350697 ALDH4A1P30038 563 aa13.62□□□□□ -0.23
SEC13-202ENST00000350697 DHRS13Q6UX07 377 aa13.62□□□□□ -0.23
SEC13-202ENST00000350697 TMEM26Q6ZUK4 368 aa13.62□□□□□ -0.23
SEC13-202ENST00000350697 STRA8Q7Z7C7 330 aa13.62□□□□□ -0.23
SEC13-202ENST00000350697 ZBTB2Q8N680 514 aa13.62□□□□□ -0.23
SEC13-202ENST00000350697 Q8N9G6 341 aaPredicted RBP13.62□□□□□ -0.23
SEC13-202ENST00000350697 FBF1Q8TES7 1133 aa13.62□□□□□ -0.23
SEC13-202ENST00000350697 TFGQ92734 400 aaPredicted RBP13.62□□□□□ -0.23
SEC13-202ENST00000350697 FAM136AQ96C01 138 aa13.62□□□□□ -0.23
SEC13-202ENST00000350697 KLHL42Q9P2K6 505 aa13.62□□□□□ -0.23
SEC13-202ENST00000350697 MED16Q9Y2X0 877 aa13.62□□□□□ -0.23
SEC13-202ENST00000350697 CFAP20Q9Y6A4 193 aaKnown RBP13.62□□□□□ -0.23
SEC13-202ENST00000350697 COLEC10Q9Y6Z7 277 aa13.62□□□□□ -0.23
SEC13-202ENST00000350697 CCDC151A5D8V7 595 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 LILRA5A6NI73 299 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 CXorf49A8MYA2 514 aaPredicted RBP13.61□□□□□ -0.23
SEC13-202ENST00000350697 PIAS1O75925 651 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 ACADLP28330 430 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 NDUFS1P28331 727 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 ABCG1P45844 678 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 CLCN7P51798 805 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 EPHA4P54764 986 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 OR1D5P58170 312 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 NAB1Q13506 487 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 KRT33BQ14525 404 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 TTLL9Q3SXZ7 439 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 KBTBD12Q3ZCT8 623 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 MAP9Q49MG5 647 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 RBM20Q5T481 1227 aaKnown RBP13.61□□□□□ -0.23
SEC13-202ENST00000350697 ZC3HC1Q86WB0 502 aaKnown RBP13.61□□□□□ -0.23
SEC13-202ENST00000350697 VRK3Q8IV63 474 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 CTAGE3PQ8IX95 158 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 GPATCH11Q8N954 259 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 ZFPM2Q8WW38 1151 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.61□□□□□ -0.23
SEC13-202ENST00000350697 NDNQ99608 321 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 GPR21Q99679 349 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 CPNE1Q99829 537 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 LRRN3Q9H3W5 708 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 RHOJQ9H4E5 214 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 MVB12BQ9H7P6 319 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 KCNK4Q9NYG8 393 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 TAS2R13Q9NYV9 303 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 TXNDC16Q9P2K2 825 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 GALPQ9UBC7 116 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 DHRS7Q9Y394 339 aa13.61□□□□□ -0.23
SEC13-202ENST00000350697 IGHV1OR21-1A0A087WYE8 117 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 PRAMEF33A0A0G2JMD5 474 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 NTN3O00634 580 aaPredicted RBP13.6□□□□□ -0.23
SEC13-202ENST00000350697 B4GAT1O43505 415 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 TCEA3O75764 348 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 ACSL3O95573 720 aa13.6□□□□□ -0.23
SEC13-202ENST00000350697 RPLP0P05388 317 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms