RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 MRGPRX2Q96LB1 330 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 TSGA13Q96PP4 275 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 FCRL5Q96RD9 977 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 RBM4BQ9BQ04 359 aaKnown RBP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 RBM4Q9BWF3 364 aaKnown RBP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 POLR3BQ9NW08 1133 aaPredicted RBP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 WDR70Q9NW82 654 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 GPSM3Q9Y4H4 160 aa18.37■□□□□ 0.53
SCARF1-202ENST00000348987 LAMA2P24043 3122 aaKnown RBP18.37■□□□□ 0.53
SCARF1-202ENST00000348987 KMOO15229 486 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 ITGB1P05556 798 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 ITGB6P18564 788 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 ST13P50502 369 aaKnown RBP18.36■□□□□ 0.53
SCARF1-202ENST00000348987 SYT6Q5T7P8 510 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-202ENST00000348987 CXCL17Q6UXB2 119 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 TMEM179BQ7Z7N9 219 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 GATAD2AQ86YP4 633 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 SIX5Q8N196 739 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 METTL4Q8N3J2 472 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 TSPEARQ8WU66 669 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 ISG20Q96AZ6 181 aaKnown RBP18.36■□□□□ 0.53
SCARF1-202ENST00000348987 TSPAN17Q96FV3 270 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 FSD1LQ9BXM9 530 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 DDX28Q9NUL7 540 aaKnown RBP18.36■□□□□ 0.53
SCARF1-202ENST00000348987 OPTCQ9UBM4 332 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 DNAJB9Q9UBS3 223 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 ZNF221Q9UK13 617 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 EIF3LQ9Y262 564 aaKnown RBP18.36■□□□□ 0.53
SCARF1-202ENST00000348987 BOLA1Q9Y3E2 137 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 U3KQV3 271 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 H0Y626 953 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 PSMD3O43242 534 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 TRIM16O95361 564 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 PTTG1O95997 202 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 CLCN5P51795 746 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 EIF4EBP2Q13542 120 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-202ENST00000348987 GDPD3Q7L5L3 318 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 SYTL1Q8IYJ3 562 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 PSD4Q8NDX1 1056 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 NUDT8Q8WV74 236 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 AGO3Q9H9G7 860 aaKnown RBP18.36■□□□□ 0.53
SCARF1-202ENST00000348987 ZBTB20Q9HC78 741 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-202ENST00000348987 PRDM8Q9NQV8 689 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 COMMD8Q9NX08 183 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 C3orf18Q9UK00 162 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 MYLKQ15746 1914 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 PABPN1LA6NDY0 278 aaKnown RBP18.36■□□□□ 0.53
SCARF1-202ENST00000348987 AGAP5A6NIR3 686 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 IRAK2O43187 625 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 IGLV3-25P01717 112 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 SLC4A1P02730 911 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 PCSK1P29120 753 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 MAXP61244 160 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 IHHQ14623 411 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 SLC14A2Q15849 920 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 PRSS48Q7RTY5 328 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 B3GNT8Q7Z7M8 397 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 IL17RDQ8NFM7 739 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 DCSTAMPQ9H295 470 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 SEMA4BQ9NPR2 832 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-202ENST00000348987 AIG1Q9NVV5 245 aa18.36■□□□□ 0.53
SCARF1-202ENST00000348987 SAGE2PA6NJ88 616 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 EFCAB9A8MZ26 197 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 MATN3O15232 486 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 CRCPO75575 148 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 CTGFP29279 349 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 CPT1AP50416 773 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 MRPS15P82914 257 aaKnown RBP18.35■□□□□ 0.53
SCARF1-202ENST00000348987 PURAQ00577 322 aaKnown RBP18.35■□□□□ 0.53
SCARF1-202ENST00000348987 CHRNEQ04844 493 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 PLA2G4EQ3MJ16 856 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 ZNF404Q494X3 552 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 ATAD3CQ5T2N8 411 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 LAIR1Q6GTX8 287 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 RANBP10Q6VN20 620 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 OR6F1Q8NGZ6 308 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 PABPC5Q96DU9 382 aaKnown RBP18.35■□□□□ 0.53
SCARF1-202ENST00000348987 CYP2S1Q96SQ9 504 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 USE1Q9NZ43 259 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 LAMA3Q16787 3333 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 BCKDKO14874 412 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 SSX4O60224 188 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 ANXA9O76027 345 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 MT-ND2P03891 347 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 CD36P16671 472 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 ALOX12P18054 663 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 RYKP34925 604 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 NFKB2Q00653 900 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 AGAP6Q5VW22 663 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 CES5AQ6NT32 575 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 FAM171BQ6P995 826 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 AGAP4Q96P64 663 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 AP5M1Q9H0R1 490 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 CRYL1Q9Y2S2 319 aa18.35■□□□□ 0.53
SCARF1-202ENST00000348987 ALX3O95076 343 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 GGT1P19440 569 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 SLC35A2P78381 396 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 MRPS6P82932 125 aaKnown RBP18.34■□□□□ 0.53
SCARF1-202ENST00000348987 GALNT5Q7Z7M9 940 aa18.34■□□□□ 0.53
SCARF1-202ENST00000348987 NLGN4XQ8N0W4 816 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms