RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 CLCNKAP51800 687 aa26.51■■□□□ 1.83
SSBP4-202ENST00000348495 KPNA2P52292 529 aaKnown RBP26.51■■□□□ 1.83
SSBP4-202ENST00000348495 LVRNQ6Q4G3 990 aa26.51■■□□□ 1.83
SSBP4-202ENST00000348495 RASGRP3Q8IV61 690 aa26.51■■□□□ 1.83
SSBP4-202ENST00000348495 RHEBL1Q8TAI7 183 aa26.51■■□□□ 1.83
SSBP4-202ENST00000348495 MRPL57Q9BQC6 102 aaKnown RBP26.51■■□□□ 1.83
SSBP4-202ENST00000348495 TMEM168Q9H0V1 697 aa26.51■■□□□ 1.83
SSBP4-202ENST00000348495 CAAP1Q9H8G2 361 aa26.51■■□□□ 1.83
SSBP4-202ENST00000348495 CNOT10Q9H9A5 744 aaKnown RBP26.51■■□□□ 1.83
SSBP4-202ENST00000348495 XPR1Q9UBH6 696 aa26.51■■□□□ 1.83
SSBP4-202ENST00000348495 SUSD2Q9UGT4 822 aa26.51■■□□□ 1.83
SSBP4-202ENST00000348495 CDC7O00311 574 aa26.5■■□□□ 1.83
SSBP4-202ENST00000348495 MATN4O95460 622 aa26.5■■□□□ 1.83
SSBP4-202ENST00000348495 RBP1P09455 135 aa26.5■■□□□ 1.83
SSBP4-202ENST00000348495 DHRS4L1P0CG22 281 aa26.5■■□□□ 1.83
SSBP4-202ENST00000348495 KCNC1P48547 511 aa26.5■■□□□ 1.83
SSBP4-202ENST00000348495 OR4D1Q15615 310 aa26.5■■□□□ 1.83
SSBP4-202ENST00000348495 SYT12Q8IV01 421 aa26.5■■□□□ 1.83
SSBP4-202ENST00000348495 ARFGAP2Q8N6H7 521 aa26.5■■□□□ 1.83
SSBP4-202ENST00000348495 ANKRD42Q8N9B4 389 aa26.5■■□□□ 1.83
SSBP4-202ENST00000348495 FAM76AQ8TAV0 307 aa26.5■■□□□ 1.83
SSBP4-202ENST00000348495 SKA1Q96BD8 255 aa26.5■■□□□ 1.83
SSBP4-202ENST00000348495 TCEAL2Q9H3H9 227 aaPredicted RBP26.5■■□□□ 1.83
SSBP4-202ENST00000348495 ALG9Q9H6U8 611 aa26.5■■□□□ 1.83
SSBP4-202ENST00000348495 NKIRAS1Q9NYS0 192 aa26.5■■□□□ 1.83
SSBP4-202ENST00000348495 TSR3Q9UJK0 312 aaKnown RBP26.5■■□□□ 1.83
SSBP4-202ENST00000348495 ACSL5Q9ULC5 683 aa26.5■■□□□ 1.83
SSBP4-202ENST00000348495 KCNK6Q9Y257 313 aa26.5■■□□□ 1.83
SSBP4-202ENST00000348495 NPEPPSL1A6NEC2 478 aa26.49■■□□□ 1.83
SSBP4-202ENST00000348495 H3BM21 787 aa26.49■■□□□ 1.83
SSBP4-202ENST00000348495 BTN3A1O00481 513 aa26.49■■□□□ 1.83
SSBP4-202ENST00000348495 DLL1O00548 723 aa26.49■■□□□ 1.83
SSBP4-202ENST00000348495 CSF2P04141 144 aa26.49■■□□□ 1.83
SSBP4-202ENST00000348495 NME1P15531 152 aaKnown RBP26.49■■□□□ 1.83
SSBP4-202ENST00000348495 HOXD12P35452 270 aa26.49■■□□□ 1.83
SSBP4-202ENST00000348495 BLKP51451 505 aa26.49■■□□□ 1.83
SSBP4-202ENST00000348495 WDR4P57081 412 aaKnown RBP26.49■■□□□ 1.83
SSBP4-202ENST00000348495 CTBSQ01459 385 aa26.49■■□□□ 1.83
SSBP4-202ENST00000348495 TEAD4Q15561 434 aa26.49■■□□□ 1.83
SSBP4-202ENST00000348495 TSNQ15631 228 aaKnown RBP26.49■■□□□ 1.83
SSBP4-202ENST00000348495 ZNF542PQ5EBM4 170 aa26.49■■□□□ 1.83
SSBP4-202ENST00000348495 PHACTR4Q8IZ21 702 aa26.49■■□□□ 1.83
SSBP4-202ENST00000348495 MRPL46Q9H2W6 279 aaKnown RBP26.49■■□□□ 1.83
SSBP4-202ENST00000348495 TK2O00142 265 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 C21orf59P57076 290 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 SBSNQ6UWP8 590 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 MTERF4Q7Z6M4 381 aaKnown RBP26.48■■□□□ 1.83
SSBP4-202ENST00000348495 ARMC2Q8NEN0 867 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 CCL4L1Q8NHW4 92 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 GPBAR1Q8TDU6 330 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 ASB11Q8WXH4 323 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 SCYL1Q96KG9 808 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 ATOH8Q96SQ7 321 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 DNAJC28Q9NX36 388 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 ADAMTS6Q9UKP5 1117 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 KNL1Q8NG31 2342 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 A0A1B0GVT2 93 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 CHN1P15882 459 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 ACADLP28330 430 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 ATP1A2P50993 1020 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 NRROSQ86YC3 692 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 STAG3L4Q8TBR4 150 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 PIGKQ92643 395 aa26.48■■□□□ 1.83
SSBP4-202ENST00000348495 CPSF2Q9P2I0 782 aaKnown RBP26.48■■□□□ 1.83
SSBP4-202ENST00000348495 GFYI3L273 518 aa26.47■■□□□ 1.83
SSBP4-202ENST00000348495 KERAO60938 352 aa26.47■■□□□ 1.83
SSBP4-202ENST00000348495 BNC1Q01954 994 aa26.47■■□□□ 1.83
SSBP4-202ENST00000348495 PPP1R3AQ16821 1122 aa26.47■■□□□ 1.83
SSBP4-202ENST00000348495 ADAMTSL2Q86TH1 951 aa26.47■■□□□ 1.83
SSBP4-202ENST00000348495 PDZD3Q86UT5 571 aa26.47■■□□□ 1.83
SSBP4-202ENST00000348495 DLG3Q92796 817 aa26.47■■□□□ 1.83
SSBP4-202ENST00000348495 ERVMER34-1Q9H9K5 563 aa26.47■■□□□ 1.83
SSBP4-202ENST00000348495 MLXIPLQ9NP71 852 aa26.47■■□□□ 1.83
SSBP4-202ENST00000348495 JUNDP17535 347 aa26.46■■□□□ 1.83
SSBP4-202ENST00000348495 IDSP22304 550 aa26.46■■□□□ 1.83
SSBP4-202ENST00000348495 AK4P27144 223 aaPredicted RBP26.46■■□□□ 1.83
SSBP4-202ENST00000348495 DPP6P42658 865 aa26.46■■□□□ 1.83
SSBP4-202ENST00000348495 CTSKP43235 329 aa26.46■■□□□ 1.83
SSBP4-202ENST00000348495 IRX4P78413 519 aa26.46■■□□□ 1.83
SSBP4-202ENST00000348495 PRR23BQ6ZRT6 265 aa26.46■■□□□ 1.83
SSBP4-202ENST00000348495 RDH11Q8TC12 318 aa26.46■■□□□ 1.83
SSBP4-202ENST00000348495 LRFN3Q9BTN0 628 aa26.46■■□□□ 1.83
SSBP4-202ENST00000348495 OSGEPL1Q9H4B0 414 aa26.46■■□□□ 1.83
SSBP4-202ENST00000348495 ZFC3H1O60293 1989 aaKnown RBP26.46■■□□□ 1.83
SSBP4-202ENST00000348495 CACNA1EQ15878 2313 aa26.46■■□□□ 1.83
SSBP4-202ENST00000348495 TP53BP1Q12888 1972 aaPredicted RBP26.45■■□□□ 1.83
SSBP4-202ENST00000348495 G3V2L1 256 aa26.45■■□□□ 1.83
SSBP4-202ENST00000348495 SLC16A5O15375 505 aa26.45■■□□□ 1.83
SSBP4-202ENST00000348495 PSIP1O75475 530 aaKnown RBP26.45■■□□□ 1.83
SSBP4-202ENST00000348495 C8GP07360 202 aa26.45■■□□□ 1.83
SSBP4-202ENST00000348495 ILF3Q12906 894 aaKnown RBP eCLIP26.45■■□□□ 1.832e-11■■□□□ 11.9
SSBP4-202ENST00000348495 ABRQ12979 859 aa26.45■■□□□ 1.83
SSBP4-202ENST00000348495 SP140Q13342 867 aa26.45■■□□□ 1.83
SSBP4-202ENST00000348495 SEPT7Q16181 437 aaKnown RBP26.45■■□□□ 1.83
SSBP4-202ENST00000348495 KIF19Q2TAC6 998 aa26.45■■□□□ 1.83
SSBP4-202ENST00000348495 SPDYE1Q8NFV5 336 aaPredicted RBP26.45■■□□□ 1.83
SSBP4-202ENST00000348495 MGARPQ8TDB4 240 aa26.45■■□□□ 1.83
SSBP4-202ENST00000348495 SKA2Q8WVK7 121 aaPredicted RBP26.45■■□□□ 1.83
SSBP4-202ENST00000348495 RMDN2Q96LZ7 410 aa26.45■■□□□ 1.83
SSBP4-202ENST00000348495 LRRC61Q9BV99 259 aa26.45■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms