RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 RBBP7Q16576 425 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 ZNF658BQ4V348 819 aaPredicted RBP13.3□□□□□ -0.28
CDC42-202ENST00000344548 LDLRAP1Q5SW96 308 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 UBE2R2Q712K3 238 aaPredicted RBP13.3□□□□□ -0.28
CDC42-202ENST00000344548 DSG4Q86SJ6 1040 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 HDDC3Q8N4P3 179 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 CPSF7Q8N684 471 aaKnown RBP13.3□□□□□ -0.28
CDC42-202ENST00000344548 OR2T11Q8NH01 316 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 TUBB6Q9BUF5 446 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 ATXN10Q9UBB4 475 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 CD207Q9UJ71 328 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 TMEM98Q9Y2Y6 226 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 VCANP13611 3396 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 NARSO43776 548 aaKnown RBP13.3□□□□□ -0.28
CDC42-202ENST00000344548 CCNT2O60583 730 aaKnown RBP13.3□□□□□ -0.28
CDC42-202ENST00000344548 SORBS2O94875 1100 aaKnown RBP13.3□□□□□ -0.28
CDC42-202ENST00000344548 CBSLP0DN79 551 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 COX4I1P13073 169 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 VCLP18206 1134 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 CD72P21854 359 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 CBSP35520 551 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 PRLHRP49683 370 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 GTF2H2Q13888 395 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 CRY1Q16526 586 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 GTF2H2CQ6P1K8 395 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 SLC44A3Q8N4M1 653 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 EFCAB3Q8N7B9 438 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 OR4F6Q8NGB9 312 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 OR9I1Q8NGQ6 314 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 ACTRT2Q8TDY3 377 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 PYCR2Q96C36 320 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 ASB2Q96Q27 587 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 CD244Q9BZW8 370 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 RASSF4Q9H2L5 321 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 CD248Q9HCU0 757 aa13.3□□□□□ -0.28
CDC42-202ENST00000344548 MBNL1Q9NR56 388 aaKnown RBP13.3□□□□□ -0.28
CDC42-202ENST00000344548 ZFR2Q9UPR6 939 aaKnown RBP13.3□□□□□ -0.28
CDC42-202ENST00000344548 PRR23AA6NEV1 266 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 CFAP99D6REC4 459 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 GFYI3L273 518 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 RNASEH2AO75792 299 aaKnown RBP13.29□□□□□ -0.28
CDC42-202ENST00000344548 SLCO2B1O94956 709 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 TNFRSF4P43489 277 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 PIK3CGP48736 1102 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 DPTQ07507 201 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 ABRQ12979 859 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 TRAF3Q13114 568 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 WSCD2Q2TBF2 565 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 PLEKHS1Q5SXH7 462 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 GPRIN3Q6ZVF9 776 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 SNX32Q86XE0 403 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 DDIASQ8IXT1 998 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 CFAP61Q8NHU2 1237 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 CXorf40AQ8TE69 158 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 STON2Q8WXE9 905 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 FAR2Q96K12 515 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 SLC12A9Q9BXP2 914 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 IPPKQ9H8X2 491 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 RDH14Q9HBH5 336 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 RAD18Q9NS91 495 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 KLHL42Q9P2K6 505 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 POLG2Q9UHN1 485 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 PIAS3Q9Y6X2 628 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 SLC5A10A0PJK1 596 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 HNRNPCL1O60812 293 aaKnown RBP13.29□□□□□ -0.28
CDC42-202ENST00000344548 AP2A2O94973 939 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 PCDH8O95206 1070 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 ENO3P13929 434 aaPredicted RBP13.29□□□□□ -0.28
CDC42-202ENST00000344548 ZNF8P17098 575 aaPredicted RBP13.29□□□□□ -0.28
CDC42-202ENST00000344548 POU3F3P20264 500 aaPredicted RBP13.29□□□□□ -0.28
CDC42-202ENST00000344548 TBCCQ15814 346 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.29□□□□□ -0.28
CDC42-202ENST00000344548 TMPRSS6Q8IU80 811 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 RASGRP3Q8IV61 690 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 LMNTD1Q8N9Z9 388 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 OR56A4Q8NGH8 313 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 NECTIN4Q96NY8 510 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 OSBPL6Q9BZF3 934 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 DENND2DQ9H6A0 471 aaPredicted RBP13.29□□□□□ -0.28
CDC42-202ENST00000344548 ARL15Q9NXU5 204 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 WWOXQ9NZC7 414 aa13.29□□□□□ -0.28
CDC42-202ENST00000344548 C9JVG2 144 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 SYNCRIPO60506 623 aaKnown RBP13.28□□□□□ -0.28
CDC42-202ENST00000344548 MLYCDO95822 493 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 PAK4O96013 591 aaPredicted RBP13.28□□□□□ -0.28
CDC42-202ENST00000344548 PCCBP05166 539 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 CAPN1P07384 714 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 NTSR1P30989 418 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 PLA2G4EQ3MJ16 856 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 LRIT3Q3SXY7 679 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 FAM46CQ5VWP2 391 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 SULT1C3Q6IMI6 304 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 GK5Q6ZS86 529 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 WDR60Q8WVS4 1066 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 ASZ1Q8WWH4 475 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 LRCH3Q96II8 777 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 ZNF382Q96SR6 550 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 PARVBQ9HBI1 364 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 ZFC3H1O60293 1989 aaKnown RBP13.28□□□□□ -0.28
CDC42-202ENST00000344548 COL6A3P12111 3177 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms