RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ARMC3Q5W041 872 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 TXNDC8Q6A555 127 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 PM20D1Q6GTS8 502 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 C17orf64Q86WR6 236 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 EPHX4Q8IUS5 362 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 C19orf18Q8NEA5 215 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 OR4F6Q8NGB9 312 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 KCNJ9Q92806 393 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 PSKH2Q96QS6 385 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 EBPLQ9BY08 206 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 YIPF1Q9Y548 306 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 MYOCOSA0A1B0GUC4 107 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 A0A1W2PQ67 120 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 ZBTB42B2RXF5 422 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 FAM25AB3EWG3 89 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 FAM25CB3EWG5 89 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 FAM25GB3EWG6 89 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 CNMDO75829 334 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 RSL1D1O76021 490 aaKnown RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 CSKP41240 450 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 MAGEA11P43364 429 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 CREB5Q02930 508 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 ZNF846Q147U1 533 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 KLHDC10Q6PID8 442 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 PIK3C3Q8NEB9 887 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 CXorf40AQ8TE69 158 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 BIRC7Q96CA5 298 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 MRM3Q9HC36 420 aaKnown RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 THG1LQ9NWX6 298 aaKnown RBP7.08□□□□□ -1.28
VCAN-202ENST00000342785 SLC9A8Q9Y2E8 581 aa7.08□□□□□ -1.28
VCAN-202ENST00000342785 ATG13O75143 517 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 FABP3P05413 133 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 SMIM11AP58511 58 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 LRRC73Q5JTD7 316 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 SLC15A3Q8IY34 581 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 OLFM1Q99784 485 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 FAIM2Q9BWQ8 316 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 TRIM8Q9BZR9 551 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 R3HDMLQ9H3Y0 253 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.07□□□□□ -1.28
VCAN-202ENST00000342785 PCDHGA11Q9Y5H2 935 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 MBLAC1A4D2B0 266 aaPredicted RBP7.07□□□□□ -1.28
VCAN-202ENST00000342785 LRRC14BA6NHZ5 514 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 MAGEB17A8MXT2 336 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 SERPINB7O75635 380 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 SERPINA1P01009 418 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 PCSK2P16519 638 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 IFNGR2P38484 337 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 SRSF11Q05519 484 aaKnown RBP7.07□□□□□ -1.28
VCAN-202ENST00000342785 ZBED5Q49AG3 693 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 UNC50Q53HI1 259 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 SVOPLQ8N434 492 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 IGSF8Q969P0 613 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 TMBIM1Q969X1 311 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 PRR23D1E9PI22 279 aaPredicted RBP7.07□□□□□ -1.28
VCAN-202ENST00000342785 HAS3O00219 553 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 TNFRSF11BO00300 401 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 SLC35G4P0C7Q5 338 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 PRR23D2P0DMB1 279 aaPredicted RBP7.07□□□□□ -1.28
VCAN-202ENST00000342785 CDH1P12830 882 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 NOS3P29474 1203 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 SLC11A1P49279 550 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 MANFP55145 182 aaKnown RBP7.07□□□□□ -1.28
VCAN-202ENST00000342785 FOXM1Q08050 763 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 TLR1Q15399 786 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 SPANXN4Q5MJ08 99 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 UBXN11Q5T124 520 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 TRIQKQ629K1 86 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 P2RY8Q86VZ1 359 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 IFNL1Q8IU54 200 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 ZMIZ2Q8NF64 920 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 OR4A15Q8NGL6 344 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 ZFP28Q8NHY6 868 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 RAB2BQ8WUD1 216 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 Q96MT0 163 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 TPK1Q9H3S4 243 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 KRCC1Q9NPI7 259 aaPredicted RBP7.07□□□□□ -1.28
VCAN-202ENST00000342785 RUVBL1Q9Y265 456 aaKnown RBP7.07□□□□□ -1.28
VCAN-202ENST00000342785 CAB39Q9Y376 341 aaPredicted RBP7.07□□□□□ -1.28
VCAN-202ENST00000342785 PABPC4LP0CB38 370 aaKnown RBP7.07□□□□□ -1.28
VCAN-202ENST00000342785 MAGP20916 626 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 ITGA1P56199 1179 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 C2orf80Q0P641 193 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 CHRNA6Q15825 494 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 DEF8Q6ZN54 512 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 TMEM126BQ8IUX1 230 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 CD99L2Q8TCZ2 262 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 XAGE5Q8WWM1 108 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 KLHL32Q96NJ5 620 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 SORT1Q99523 831 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 CLDN25C9JDP6 229 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 MTX2O75431 263 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 SERPINI2O75830 405 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 RPS6KA3P51812 740 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 ELP6Q0PNE2 266 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 GRB7Q14451 532 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 DPY19L1Q2PZI1 675 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 ZNF789Q5FWF6 425 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 LRRTM3Q86VH5 581 aa7.07□□□□□ -1.28
VCAN-202ENST00000342785 TTC29Q8NA56 475 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms