RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 VPS13AQ96RL7 3174 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 CXorf51AA0A1B0GTR3 108 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 MTMR11A4FU01 709 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 C2orf81A6NN90 581 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 ZNF839A8K0R7 811 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 H3BMM5 538 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 DLGAP1O14490 977 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 ACSL4O60488 711 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 CLDN11O75508 207 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 RHOBTB1O94844 696 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 TSPAN12O95859 305 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 ESR1P03372 595 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 HGFP14210 728 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 PKMP14618 531 aaKnown RBP10.62□□□□□ -0.71
RTN3-201ENST00000338850 GJA1P17302 382 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 LPOP22079 712 aaPredicted RBP10.62□□□□□ -0.71
RTN3-201ENST00000338850 EEF1DP29692 281 aaKnown RBP10.62□□□□□ -0.71
RTN3-201ENST00000338850 OR1E1P30953 314 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 SLC5A2P31639 672 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 GRIA3P42263 894 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 ZFP36L2P47974 494 aaKnown RBP10.62□□□□□ -0.71
RTN3-201ENST00000338850 NUP107P57740 925 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 ESRRGP62508 458 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 HPCAP84074 193 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 EMX2Q04743 252 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 EFEMP1Q12805 493 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 MERTKQ12866 999 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 DUSP4Q13115 394 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 DCTN2Q13561 401 aaKnown RBP10.62□□□□□ -0.71
RTN3-201ENST00000338850 TEAD2Q15562 447 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 ZBED5Q49AG3 693 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 RAP1GAP2Q684P5 730 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 NADSYN1Q6IA69 706 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 VITQ6UXI7 678 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 ZNF852Q6ZMS4 543 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 TFAP2DQ7Z6R9 452 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 PATL1Q86TB9 770 aaKnown RBP10.62□□□□□ -0.71
RTN3-201ENST00000338850 PIM3Q86V86 326 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 ZFAND4Q86XD8 727 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 TMC8Q8IU68 726 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 EPHX4Q8IUS5 362 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 TRIML2Q8N7C3 387 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 OR8J3Q8NGG0 315 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 DNAJB8Q8NHS0 232 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 FUBP1Q96AE4 644 aaKnown RBP10.62□□□□□ -0.71
RTN3-201ENST00000338850 CLDN23Q96B33 292 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 TUBGCP3Q96CW5 907 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 NMD3Q96D46 503 aaKnown RBP10.62□□□□□ -0.71
RTN3-201ENST00000338850 NELL2Q99435 816 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 SLC29A1Q99808 456 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 TRMT61BQ9BVS5 477 aaKnown RBP10.62□□□□□ -0.71
RTN3-201ENST00000338850 ALG2Q9H553 416 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 TRPV4Q9HBA0 871 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 UBA2Q9UBT2 640 aaPredicted RBP10.62□□□□□ -0.71
RTN3-201ENST00000338850 ANAPC2Q9UJX6 822 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 RNF112Q9ULX5 631 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 ZNF711Q9Y462 761 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 PCDHB3Q9Y5E6 796 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 CACNA1IQ9P0X4 2223 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 OTOGLQ3ZCN5 2332 aa10.62□□□□□ -0.71
RTN3-201ENST00000338850 F5P12259 2224 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 MYO15AQ9UKN7 3530 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 SLC12A8A0AV02 714 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 SUPT3HB4E1H0 165 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 MUSKO15146 869 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 ACOX3O15254 700 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 INSIG1O15503 277 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 SNX2O60749 519 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 SUPT3HO75486 399 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 NDUFS3O75489 264 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 WDR47O94967 919 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 CDH1P12830 882 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 IL1RNP18510 177 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 TCN1P20061 433 aaPredicted RBP10.61□□□□□ -0.71
RTN3-201ENST00000338850 JAK1P23458 1154 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 MSX2P35548 267 aaPredicted RBP10.61□□□□□ -0.71
RTN3-201ENST00000338850 CAPGP40121 348 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 VIPR2P41587 438 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 PTGER3P43115 390 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 GSK3BP49841 420 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 EPHB3P54753 998 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 GRSF1Q12849 480 aaKnown RBP eCLIP10.61□□□□□ -0.71
RTN3-201ENST00000338850 PRKG2Q13237 762 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 PLD1Q13393 1074 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 FZD5Q13467 585 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 RPS6KA2Q15349 733 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 PFKFB4Q16877 469 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 ZNF528Q3MIS6 628 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 LRRC23Q53EV4 343 aaPredicted RBP10.61□□□□□ -0.71
RTN3-201ENST00000338850 CDKL4Q5MAI5 379 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 IYDQ6PHW0 289 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 ZC3H14Q6PJT7 736 aaKnown RBP10.61□□□□□ -0.71
RTN3-201ENST00000338850 CERS6Q6ZMG9 384 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 GPRIN3Q6ZVF9 776 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 AMIGO2Q86SJ2 522 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 ADAMTSL2Q86TH1 951 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 ZNF687Q8N1G0 1237 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 TTC9BQ8N6N2 239 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 ATAD1Q8NBU5 361 aa10.61□□□□□ -0.71
RTN3-201ENST00000338850 PDPRQ8NCN5 879 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms