RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 STAMBPL1Q96FJ0 436 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 ZNF514Q96K75 400 aaPredicted RBP13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 COPS8Q99627 209 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 FERMT1Q9BQL6 677 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 CCM2Q9BSQ5 444 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 LHX9Q9NQ69 397 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 FGF21Q9NSA1 209 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 NLE1Q9NVX2 485 aaPredicted RBP13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 RARRES3Q9UL19 164 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 CAPN6Q9Y6Q1 641 aa13.02□□□□□ -0.33
NUDCD3-201ENST00000338427 TLN1Q9Y490 2541 aaKnown RBP13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 TRBV5-4A0A0C4DH59 114 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 PIPSLA2A3N6 862 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 CDC14CA4D256 554 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 SLC35G4P0C7Q5 338 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 CCNYL3P0C7X3 344 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 SFTPCP11686 197 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 PVRP15151 417 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 ITGALP20701 1170 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 PRLHRP49683 370 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 ARL4DP49703 201 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 KIF5AQ12840 1032 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 DNASE1L3Q13609 305 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 MAP7Q14244 749 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 DBN1Q16643 649 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 D2HGDHQ8N465 521 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 LMNTD1Q8N9Z9 388 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 GLIS1Q8NBF1 620 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 C1orf54Q8WWF1 131 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 UBXN4Q92575 508 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 ULK4Q96C45 1275 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 HES6Q96HZ4 224 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 CALR3Q96L12 384 aaKnown RBP13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 EFHD1Q9BUP0 239 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 OR52A5Q9H2C5 316 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 CLMPQ9H6B4 373 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 KIR3DX1Q9H7L2 352 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 COG4Q9H9E3 785 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 ETNK1Q9HBU6 452 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 PDE7BQ9NP56 450 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 SMARCAL1Q9NZC9 954 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 SLC2A6Q9UGQ3 507 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 KCNMB2Q9Y691 235 aa13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 FLNBO75369 2602 aaKnown RBP13.01□□□□□ -0.33
NUDCD3-201ENST00000338427 CCDC162PA2VCL2 907 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 GOLGA6L9A6NEM1 432 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 TPBGLP0DKB5 382 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 RALBP11234 206 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 ACRV1P26436 265 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 HADHAP40939 763 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 HSD11B2P80365 405 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 TLE1Q04724 770 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 SNX1Q13596 522 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 ARMC6Q6NXE6 501 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 KLHL35Q6PF15 583 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 OOSP2Q86WS3 158 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 UBL4BQ8N7F7 174 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 TTC13Q8NBP0 860 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 HM13Q8TCT9 377 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 APOBEC4Q8WW27 367 aaKnown RBP13□□□□□ -0.33
NUDCD3-201ENST00000338427 LCN9Q8WX39 176 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 ZNF501Q96CX3 271 aaPredicted RBP13□□□□□ -0.33
NUDCD3-201ENST00000338427 ZNF778Q96MU6 729 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 CATSPER2Q96P56 530 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 TLR10Q9BXR5 811 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 ADNPQ9H2P0 1102 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 KCND1Q9NSA2 647 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 GUCA1BQ9UMX6 200 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 COLEC10Q9Y6Z7 277 aa13□□□□□ -0.33
NUDCD3-201ENST00000338427 IGLV3-16A0A075B6K0 115 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 C17orf113A0A1B0GUU1 675 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 GSAPA4D1B5 854 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 GOLGA6L3A6NEY3 463 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 TLCD2A6NGC4 264 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 BTN3A1O00481 513 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 OR1I1O60431 355 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 CREG1O75629 220 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 DNAJB5O75953 348 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 AP2A1O95782 977 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 ZSCAN5DPP0CG00 497 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 ST6GAL1P15907 406 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 CDH3P22223 829 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 PRDX3P30048 256 aaKnown RBP12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 CSE1LP55060 971 aaKnown RBP12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 PDE1BQ01064 536 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 ACY1Q03154 408 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 GPS2Q13227 327 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 GPR33Q49SQ1 333 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 OR52E1Q8NGJ3 308 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 C9orf43Q8TAL5 461 aaPredicted RBP12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 STYXQ8WUJ0 223 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 ZFPM2Q8WW38 1151 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 HDAC10Q969S8 669 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 TRIM55Q9BYV6 548 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 TWSG1Q9GZX9 223 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 SRMSQ9H3Y6 488 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 LRRC40Q9H9A6 602 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 TLK1Q9UKI8 766 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms