RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 SCN2BO60939 215 aa10.21□□□□□ -0.77
SPTBN1-201ENST00000333896 FABP3P05413 133 aa10.21□□□□□ -0.77
SPTBN1-201ENST00000333896 ACSM2AQ08AH3 577 aa10.21□□□□□ -0.77
SPTBN1-201ENST00000333896 MOGSQ13724 837 aa10.21□□□□□ -0.77
SPTBN1-201ENST00000333896 ACSM2BQ68CK6 577 aa10.21□□□□□ -0.77
SPTBN1-201ENST00000333896 RAET1EQ8TD07 263 aa10.21□□□□□ -0.77
SPTBN1-201ENST00000333896 PBDC1Q9BVG4 233 aa10.21□□□□□ -0.77
SPTBN1-201ENST00000333896 COMMD4Q9H0A8 199 aa10.21□□□□□ -0.77
SPTBN1-201ENST00000333896 PACSIN3Q9UKS6 424 aa10.21□□□□□ -0.77
SPTBN1-201ENST00000333896 INPPL1O15357 1258 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 ICMTO60725 284 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 IFNA2P01563 188 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 EPHA3P29320 983 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 ZNF627Q7L945 461 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 SDR16C5Q8N3Y7 309 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 PRELID2Q8N945 189 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 GDPD1Q8N9F7 314 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 SNX33Q8WV41 574 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 DNAJB3Q8WWF6 145 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 UBE2E3Q969T4 207 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 PELOQ9BRX2 385 aaKnown RBP10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 PRMT8Q9NR22 394 aaPredicted RBP10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 TNFRSF10DQ9UBN6 386 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 PREX1Q8TCU6 1659 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 PGLSO95336 258 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 SGPL1O95470 568 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 TXNP10599 105 aaKnown RBP10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 EFEMP1Q12805 493 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 TEAD4Q15561 434 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 STXBP5Q5T5C0 1151 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 EFCAB12Q6NXP0 572 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 CHST15Q7LFX5 561 aaPredicted RBP10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 C3orf58Q8NDZ4 430 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 TBL1YQ9BQ87 522 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 FAM126AQ9BYI3 521 aaPredicted RBP10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 RPL36Q9Y3U8 105 aaKnown RBP10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 GAKO14976 1311 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 FXYD6-FXYD2A0A087WZ82 144 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 SMAD9O15198 467 aaKnown RBP10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 EGFRP00533 1210 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 CSF1RP07333 972 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 SLC41A1Q8IVJ1 513 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 HDAC10Q969S8 669 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 C3orf49Q96BT1 292 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 GAD1Q99259 594 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 CNPPD1Q9BV87 410 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 FXYD6Q9H0Q3 95 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 ARHGEF28Q8N1W1 1705 aaKnown RBP10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 SALL1Q9NSC2 1324 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 QSOX1O00391 747 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 MTHFD1P11586 935 aaKnown RBP10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 NAGLUP54802 743 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 POMZP3Q6PJE2 187 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 APTXQ7Z2E3 356 aaKnown RBP10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 GPR156Q8NFN8 814 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 CCDC74AQ96AQ1 378 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 IDI2Q9BXS1 227 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 GULP1Q9UBP9 304 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 PPM1HQ9ULR3 514 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 PCDHB12Q9Y5F1 795 aa10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 CEP170BQ9Y4F5 1589 aaPredicted RBP10.21□□□□□ -0.78
SPTBN1-201ENST00000333896 ELOVL7A1L3X0 281 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 OTOL1A6NHN0 477 aaPredicted RBP10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 SLC28A1O00337 649 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 CLCN5P51795 746 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 AIMP2Q13155 320 aaKnown RBP10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 RAB39AQ14964 217 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 PANX3Q96QZ0 392 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 SEMA6BQ9H3T3 888 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 METP08581 1390 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 EFCAB7A8K855 629 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 FFAR3O14843 346 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 GPR42O15529 346 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 RFPL3O75679 317 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 EIF2DP41214 584 aaKnown RBP10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 ANXA8L1Q5VT79 327 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 SLC30A6Q6NXT4 461 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 CEP97Q8IW35 865 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 GPR65Q8IYL9 337 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 SAMD14Q8IZD0 417 aaPredicted RBP10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 OR7G2Q8NG99 324 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 LRTOMTQ8WZ04 291 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 ZFP3Q96NJ6 502 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 NPAS2Q99743 824 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 DNAJB9Q9UBS3 223 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 TBX20Q9UMR3 447 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 J3QRK9 145 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 CKMP06732 381 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 ARCN1P48444 511 aaKnown RBP10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 USP41Q3LFD5 358 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 KLHL26Q53HC5 615 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 SPIN3Q5JUX0 258 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 MOB2Q70IA6 237 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 DPPA2Q7Z7J5 298 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 TMEM139Q8IV31 216 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 COQ8AQ8NI60 647 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 FBXL8Q96CD0 374 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 TBC1D17Q9HA65 648 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 CDHR5Q9HBB8 845 aa10.2□□□□□ -0.78
SPTBN1-201ENST00000333896 LRRC4CQ9HCJ2 640 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms