RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 PPP3R2Q96LZ3 170 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 UGT2B28Q9BY64 529 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 PAIP1Q9H074 479 aaKnown RBP15.1■□□□□ 0.01
BRCC3-201ENST00000330045 GORASP2Q9H8Y8 452 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 SMPD4Q9NXE4 827 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 VAPAQ9P0L0 249 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 ZMYM5Q9UJ78 669 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 PKP3Q9Y446 797 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 NEUROG3Q9Y4Z2 214 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 CDH23Q9H251 3354 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 GOLGA8CPA6NN73 597 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 RAD51BO15315 384 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 DFNA5O60443 496 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 SLC2A4P14672 509 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 CD247P20963 164 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 TWF1Q12792 350 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 TRAF3Q13114 568 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 CBX2Q14781 532 aaPredicted RBP15.1■□□□□ 0.01
BRCC3-201ENST00000330045 KIAA0040Q15053 153 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 PLA2G4EQ3MJ16 856 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 RNF219Q5W0B1 726 aaPredicted RBP15.1■□□□□ 0.01
BRCC3-201ENST00000330045 LINGO4Q6UY18 593 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 C16orf59Q7L2K0 433 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 DEFB128Q7Z7B8 93 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 ABI1Q8IZP0 508 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 OR2T12Q8NG77 320 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 TBC1D15Q8TC07 691 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 CCDC115Q96NT0 180 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 TTLL2Q9BWV7 592 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 FANCEQ9HB96 536 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 IL17CQ9P0M4 197 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 PCDHB1Q9Y5F3 818 aa15.1■□□□□ 0.01
BRCC3-201ENST00000330045 A0A1B0GVM2 712 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 G3V2T6 193 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 GSTA4O15217 222 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 TSPAN3O60637 253 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 KLKB1P03952 638 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 ALDH2P05091 517 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 JUNBP17275 347 aaPredicted RBP15.09■□□□□ 0.01
BRCC3-201ENST00000330045 MATN1P21941 496 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
BRCC3-201ENST00000330045 RPL38P63173 70 aaKnown RBP15.09■□□□□ 0.01
BRCC3-201ENST00000330045 ARF5P84085 180 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 ZNF829Q3KNS6 432 aaPredicted RBP15.09■□□□□ 0.01
BRCC3-201ENST00000330045 RTP2Q5QGT7 225 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 BROXQ5VW32 411 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 DUS1LQ6P1R4 473 aaKnown RBP15.09■□□□□ 0.01
BRCC3-201ENST00000330045 NCEH1Q6PIU2 408 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 Q6ZNX1 250 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 THAP5Q7Z6K1 395 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 SLC13A3Q8WWT9 602 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 SDCCAG3Q96C92 435 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 AURKBQ96GD4 344 aaPredicted RBP15.09■□□□□ 0.01
BRCC3-201ENST00000330045 ZBTB18Q99592 522 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 NSUN3Q9H649 340 aaKnown RBP15.09■□□□□ 0.01
BRCC3-201ENST00000330045 CCL27Q9Y4X3 112 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.09■□□□□ 0.01
BRCC3-201ENST00000330045 TBC1D4O60343 1298 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 GUCA1CO95843 209 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 CD160O95971 181 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 HPRP00739 348 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 CORO1AP31146 461 aaKnown RBP15.09■□□□□ 0.01
BRCC3-201ENST00000330045 HSPA7P48741 367 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 ANKDD1AQ495B1 522 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 PTRHD1Q6GMV3 140 aaKnown RBP15.09■□□□□ 0.01
BRCC3-201ENST00000330045 SULT1C3Q6IMI6 304 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 FUT10Q6P4F1 479 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 CHST9Q7L1S5 443 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 TMCO2Q7Z6W1 182 aaPredicted RBP15.09■□□□□ 0.01
BRCC3-201ENST00000330045 CHCHD4Q8N4Q1 142 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 FAM86B1Q8N7N1 296 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 SMYD1Q8NB12 490 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 OR10A6Q8NH74 314 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 FBXO30Q8TB52 745 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 BORCS5Q969J3 196 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 THUMPD3Q9BV44 507 aaKnown RBP15.09■□□□□ 0.01
BRCC3-201ENST00000330045 GPR63Q9BZJ6 419 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 CIPCQ9C0C6 399 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 CARS2Q9HA77 564 aaKnown RBP15.09■□□□□ 0.01
BRCC3-201ENST00000330045 TBC1D23Q9NUY8 699 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 MARCH5Q9NX47 278 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 TMEM161AQ9NX61 479 aa15.09■□□□□ 0.01
BRCC3-201ENST00000330045 EIF3LQ9Y262 564 aaKnown RBP15.09■□□□□ 0.01
BRCC3-201ENST00000330045 CST1P01037 141 aa15.08■□□□□ 0.01
BRCC3-201ENST00000330045 CCNA2P20248 432 aa15.08■□□□□ 0.01
BRCC3-201ENST00000330045 MSH3P20585 1137 aa15.08■□□□□ 0.01
BRCC3-201ENST00000330045 AKT1P31749 480 aa15.08■□□□□ 0.01
BRCC3-201ENST00000330045 TMBIM6P55061 237 aa15.08■□□□□ 0.01
BRCC3-201ENST00000330045 NFATC3Q12968 1075 aa15.08■□□□□ 0.01
BRCC3-201ENST00000330045 BNIP3Q12983 259 aa15.08■□□□□ 0.01
BRCC3-201ENST00000330045 PTGR1Q14914 329 aa15.08■□□□□ 0.01
BRCC3-201ENST00000330045 MAPKAPK3Q16644 382 aa15.08■□□□□ 0.01
BRCC3-201ENST00000330045 RBM48Q5RL73 367 aaKnown RBP15.08■□□□□ 0.01
BRCC3-201ENST00000330045 TTC23Q5W5X9 447 aa15.08■□□□□ 0.01
BRCC3-201ENST00000330045 ENPP6Q6UWR7 440 aa15.08■□□□□ 0.01
BRCC3-201ENST00000330045 NECAB2Q7Z6G3 386 aa15.08■□□□□ 0.01
BRCC3-201ENST00000330045 C8orf59Q8N0T1 100 aaPredicted RBP15.08■□□□□ 0.01
BRCC3-201ENST00000330045 TTC16Q8NEE8 873 aa15.08■□□□□ 0.01
BRCC3-201ENST00000330045 PDZD8Q8NEN9 1154 aa15.08■□□□□ 0.01
BRCC3-201ENST00000330045 GTF2H4Q92759 462 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms