RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 KBTBD8Q8NFY9 601 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 NR4A3Q92570 626 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 ZBED6CLQ96FA7 236 aaPredicted RBP11.24□□□□□ -0.61
COL4A5-201ENST00000328300 MS4A4AQ96JQ5 239 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 SLC32A1Q9H598 525 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 CRNNQ9UBG3 495 aaPredicted RBP11.24□□□□□ -0.61
COL4A5-201ENST00000328300 TEX264Q9Y6I9 313 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 FAM155BO75949 473 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 STC1P52823 247 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 SPIBQ01892 262 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 ARSIQ5FYB1 569 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 KLHDC10Q6PID8 442 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 NETO2Q8NC67 525 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 ZSCAN18Q8TBC5 510 aaPredicted RBP11.24□□□□□ -0.61
COL4A5-201ENST00000328300 KCNJ9Q92806 393 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 SLC38A3Q99624 504 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 OR2AG1Q9H205 316 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 C8orf33Q9H7E9 229 aaPredicted RBP11.24□□□□□ -0.61
COL4A5-201ENST00000328300 GKN1Q9NS71 199 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 DDX18Q9NVP1 670 aaKnown RBP11.24□□□□□ -0.61
COL4A5-201ENST00000328300 SNX7Q9UNH6 387 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.24□□□□□ -0.61
COL4A5-201ENST00000328300 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.24□□□□□ -0.61
COL4A5-201ENST00000328300 ADAMDEC1O15204 470 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 FFAR2O15552 330 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 TBX18O95935 607 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 KCNQ1P51787 676 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 NR1H2P55055 460 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 RPS14P62263 151 aaKnown RBP11.24□□□□□ -0.61
COL4A5-201ENST00000328300 MARK4Q96L34 752 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 SERHL2Q9H4I8 314 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 SERHLQ9NQF3 203 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 ZIM2Q9NZV7 527 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 RIMKLBQ9ULI2 386 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 DUXAA6NLW8 204 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 SLC18A2Q05940 514 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 PWP1Q13610 501 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 PTGES3Q15185 160 aaKnown RBP11.24□□□□□ -0.61
COL4A5-201ENST00000328300 ABHD13Q7L211 337 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 HM13Q8TCT9 377 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 BTBD1Q9H0C5 482 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 ZDHHC7Q9NXF8 308 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 DAPK2Q9UIK4 370 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 PRDM4Q9UKN5 801 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 EFCAB10A6NFE3 127 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 TSPAN6O43657 245 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 SH3BGRLO75368 114 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 CAPN1P07384 714 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 MPC1LP0DKB6 136 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 PRPS1L1P21108 318 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 HOXA11P31270 313 aaPredicted RBP11.24□□□□□ -0.61
COL4A5-201ENST00000328300 UGT1A5P35504 534 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 OLR1P78380 273 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 TRIM25Q14258 630 aaKnown RBP11.24□□□□□ -0.61
COL4A5-201ENST00000328300 SLC14A2Q15849 920 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 PLEKHG6Q3KR16 790 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 ALFQ53S48 1182 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 FOXR1Q6PIV2 292 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.24□□□□□ -0.61
COL4A5-201ENST00000328300 PYDC1Q8WXC3 89 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 DEPDC7Q96QD5 511 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 PSKH2Q96QS6 385 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 RBM4BQ9BQ04 359 aaKnown RBP11.24□□□□□ -0.61
COL4A5-201ENST00000328300 RIOK2Q9BVS4 552 aaKnown RBP11.24□□□□□ -0.61
COL4A5-201ENST00000328300 RBM4Q9BWF3 364 aaKnown RBP11.24□□□□□ -0.61
COL4A5-201ENST00000328300 GTF2A1LQ9UNN4 478 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 ARL5AQ9Y689 179 aa11.24□□□□□ -0.61
COL4A5-201ENST00000328300 LCHNA4D1U4 455 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 NRIP1P48552 1158 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 CCNHP51946 323 aaPredicted RBP11.23□□□□□ -0.61
COL4A5-201ENST00000328300 PPM1JQ5JR12 505 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 C12orf66Q96MD2 445 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 OSBPL10Q9BXB5 764 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 NDRG2Q9UN36 371 aaKnown RBP11.23□□□□□ -0.61
COL4A5-201ENST00000328300 GSC2O15499 205 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 SMNDC1O75940 238 aaKnown RBP eCLIP11.23□□□□□ -0.61
COL4A5-201ENST00000328300 WASP42768 502 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 SEC13P55735 322 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 DNAJB13P59910 316 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 ATP1A4Q13733 1029 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 ZC3HC1Q86WB0 502 aaKnown RBP11.23□□□□□ -0.61
COL4A5-201ENST00000328300 GKN2Q86XP6 184 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 TCEAL8Q8IYN2 117 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 NRSN1Q8IZ57 195 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 CAMKVQ8NCB2 501 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 TOP1MTQ969P6 601 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 CMTM7Q96FZ5 175 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 MKS1Q9NXB0 559 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 CD84Q9UIB8 345 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 ERGIC3Q9Y282 383 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 FAM86C2PA6NEL3 165 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 PDPK1O15530 556 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 FABP3P05413 133 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 CTSAP10619 480 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 MTAPQ13126 283 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 REP15Q6BDI9 236 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 SPESP1Q6UW49 350 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 DENND6AQ8IWF6 608 aa11.23□□□□□ -0.61
COL4A5-201ENST00000328300 C2CD4AQ8NCU7 369 aaPredicted RBP11.23□□□□□ -0.61
COL4A5-201ENST00000328300 MAGEE2Q8TD90 523 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms