RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 SIDT2Q8NBJ9 832 aaKnown RBP20.74■□□□□ 0.91
RNF40-201ENST00000324685 MINDY2Q8NBR6 621 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 OR5T3Q8NGG3 340 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 ACBD6Q9BR61 282 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 CADM1Q9BY67 442 aaKnown RBP20.74■□□□□ 0.91
RNF40-201ENST00000324685 OR1F1O43749 312 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 STBD1O95210 358 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 PTGIRP43119 386 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 NDUFV1P49821 464 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 FEM1CQ96JP0 617 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 LMLNQ96KR4 655 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 EBPLQ9BY08 206 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 PRORSD1PA6NEY8 169 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 SLC7A4O43246 635 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 GNALP38405 381 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 DPY19L1Q2PZI1 675 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 PLPP4Q5VZY2 271 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 SLC13A3Q8WWT9 602 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 ACOT12Q8WYK0 555 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 EMID1Q96A84 441 aaPredicted RBP20.74■□□□□ 0.91
RNF40-201ENST00000324685 KCNS3Q9BQ31 491 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 GATA5Q9BWX5 397 aaPredicted RBP20.74■□□□□ 0.91
RNF40-201ENST00000324685 CHMP1AQ9HD42 196 aaPredicted RBP20.74■□□□□ 0.91
RNF40-201ENST00000324685 ARL2P36404 184 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 BANPQ8N9N5 519 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 ZMIZ2Q8NF64 920 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 NSMCE3Q96MG7 304 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 EIF2B4Q9UI10 523 aaKnown RBP20.74■□□□□ 0.91
RNF40-201ENST00000324685 RNF225M0QZC1 329 aaPredicted RBP20.74■□□□□ 0.91
RNF40-201ENST00000324685 NCK1P16333 377 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 GALNTL5Q7Z4T8 443 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 NDRG1Q92597 394 aaKnown RBP20.74■□□□□ 0.91
RNF40-201ENST00000324685 RIT1Q92963 219 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 ABCG4Q9H172 646 aa20.74■□□□□ 0.91
RNF40-201ENST00000324685 PTPRJQ12913 1337 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 FAM234BA2RU67 622 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 SYN3O14994 580 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 DCLK1O15075 740 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 PDPK1O15530 556 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 RORCP51449 518 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 SLC24A5Q71RS6 500 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 B3GALT6Q96L58 329 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 ERMAPQ96PL5 475 aaPredicted RBP20.73■□□□□ 0.91
RNF40-201ENST00000324685 FBXW2Q9UKT8 454 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 TELO2Q9Y4R8 837 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 PDHA2P29803 388 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 HADHBP55084 474 aaKnown RBP20.73■□□□□ 0.91
RNF40-201ENST00000324685 RPS14P62263 151 aaKnown RBP20.73■□□□□ 0.91
RNF40-201ENST00000324685 BRSK1Q8TDC3 778 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 SLC22A17Q8WUG5 538 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 IGSF9Q9P2J2 1179 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 OR2AG2A6NM03 316 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 TSPAN1O60635 241 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 OR4Q2P0C623 313 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 RFWD3Q6PCD5 774 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 FARSBQ9NSD9 589 aaKnown RBP20.73■□□□□ 0.91
RNF40-201ENST00000324685 PLK2Q9NYY3 685 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 PCDHGA11Q9Y5H2 935 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 METTL21EPA6NDL7 271 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 GABRDO14764 452 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 DDX6P26196 483 aaKnown RBP eCLIP20.73■□□□□ 0.91
RNF40-201ENST00000324685 GRK6P43250 576 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 AQP4P55087 323 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 C12orf65Q9H3J6 166 aaKnown RBP20.73■□□□□ 0.91
RNF40-201ENST00000324685 CD84Q9UIB8 345 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 MEMO1Q9Y316 297 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 PCDHGB7Q9Y5F8 929 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 PCDHGA10Q9Y5H3 936 aa20.73■□□□□ 0.91
RNF40-201ENST00000324685 IQCF5A8MTL0 148 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 MT-ND1P03886 318 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 FAM129CQ86XR2 697 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 SPATA22Q8NHS9 363 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 DNAJA4Q8WW22 397 aaPredicted RBP20.72■□□□□ 0.91
RNF40-201ENST00000324685 UPF1Q92900 1129 aaKnown RBP eCLIP20.72■□□□□ 0.912e-8■■■■□ 25.7
RNF40-201ENST00000324685 ANKRA2Q9H9E1 313 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 RPL36Q9Y3U8 105 aaKnown RBP20.72■□□□□ 0.91
RNF40-201ENST00000324685 FABP12A6NFH5 140 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 SPATA31D3P0C874 917 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 AZGP1P25311 298 aaKnown RBP20.72■□□□□ 0.91
RNF40-201ENST00000324685 CCNFP41002 786 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 MXD1Q05195 221 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 ZNF613Q6PF04 617 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 SPATA31D4Q6ZUB0 917 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 C1orf127Q8N9H9 656 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 FEM1AQ9BSK4 669 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 TBC1D17Q9HA65 648 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 TCF7L1Q9HCS4 588 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 ZDHHC4Q9NPG8 344 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 HEBP2Q9Y5Z4 205 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 RNASEH2AO75792 299 aaKnown RBP20.72■□□□□ 0.91
RNF40-201ENST00000324685 CST3P01034 146 aaPredicted RBP20.72■□□□□ 0.91
RNF40-201ENST00000324685 MASP1P48740 699 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 FKBP1BP68106 108 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 CRTC2Q53ET0 693 aaPredicted RBP20.72■□□□□ 0.91
RNF40-201ENST00000324685 TAC4Q86UU9 113 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 FSTL5Q8N475 847 aaPredicted RBP20.72■□□□□ 0.91
RNF40-201ENST00000324685 FAXDC2Q96IV6 333 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 FGFBP2Q9BYJ0 223 aa20.72■□□□□ 0.91
RNF40-201ENST00000324685 COL5A2P05997 1499 aaPredicted RBP20.72■□□□□ 0.91
RNF40-201ENST00000324685 ATF6P18850 670 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms