RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 B2RBV5 119 aa18.05■□□□□ 0.48
USP39-201ENST00000323701 MBTPS2O43462 519 aa18.05■□□□□ 0.48
USP39-201ENST00000323701 PCDH8O95206 1070 aa18.05■□□□□ 0.48
USP39-201ENST00000323701 PDHA2P29803 388 aa18.05■□□□□ 0.48
USP39-201ENST00000323701 CRY1Q16526 586 aa18.05■□□□□ 0.48
USP39-201ENST00000323701 RBBP7Q16576 425 aa18.05■□□□□ 0.48
USP39-201ENST00000323701 ZNF658BQ4V348 819 aaPredicted RBP18.05■□□□□ 0.48
USP39-201ENST00000323701 LETMD1Q6P1Q0 360 aa18.05■□□□□ 0.48
USP39-201ENST00000323701 UBE2R2Q712K3 238 aaPredicted RBP18.05■□□□□ 0.48
USP39-201ENST00000323701 ZNF547Q8IVP9 402 aa18.05■□□□□ 0.48
USP39-201ENST00000323701 SNX31Q8N9S9 440 aa18.05■□□□□ 0.48
USP39-201ENST00000323701 RBM15BQ8NDT2 890 aaKnown RBP18.05■□□□□ 0.48
USP39-201ENST00000323701 KLK6Q92876 244 aa18.05■□□□□ 0.48
USP39-201ENST00000323701 C19orf60Q96EN9 201 aa18.05■□□□□ 0.48
USP39-201ENST00000323701 FAR2Q96K12 515 aa18.05■□□□□ 0.48
USP39-201ENST00000323701 BTBD10Q9BSF8 475 aa18.05■□□□□ 0.48
USP39-201ENST00000323701 LGR4Q9BXB1 951 aa18.05■□□□□ 0.48
USP39-201ENST00000323701 MBNL1Q9NR56 388 aaKnown RBP18.05■□□□□ 0.48
USP39-201ENST00000323701 USP34Q70CQ2 3546 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 CFAP73A6NFT4 308 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 SLCO2B1O94956 709 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 OR4F21O95013 312 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 ENO3P13929 434 aaPredicted RBP18.04■□□□□ 0.48
USP39-201ENST00000323701 C5AR1P21730 350 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 RPIAP49247 311 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 WSCD2Q2TBF2 565 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 PLEKHS1Q5SXH7 462 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 SCIMPQ6UWF3 145 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 OR2T3Q8NH03 318 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 HMGCLL1Q8TB92 370 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 ASB2Q96Q27 587 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 MYCBPQ99417 103 aaPredicted RBP18.04■□□□□ 0.48
USP39-201ENST00000323701 CD93Q9NPY3 652 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 CIDEBQ9UHD4 219 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 TMEM98Q9Y2Y6 226 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 PRKAB1Q9Y478 270 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 COPG1Q9Y678 874 aaKnown RBP18.04■□□□□ 0.48
USP39-201ENST00000323701 PRR23AA6NEV1 266 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 GFYI3L273 518 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 ESRRBO95718 433 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 ADH1BP00325 375 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 LINC00032P0C843 101 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 GTF2H2Q13888 395 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 NAA25Q14CX7 972 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 GTF2H2CQ6P1K8 395 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 LARP4Q71RC2 724 aaKnown RBP eCLIP18.04■□□□□ 0.48
USP39-201ENST00000323701 LONP2Q86WA8 852 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 TMPRSS6Q8IU80 811 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 TEX9Q8N6V9 391 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 CEP70Q8NHQ1 597 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 ASZ1Q8WWH4 475 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 STON2Q8WXE9 905 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 SLC12A9Q9BXP2 914 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 OSBPL6Q9BZF3 934 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 RDH14Q9HBH5 336 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 ST14Q9Y5Y6 855 aa18.04■□□□□ 0.48
USP39-201ENST00000323701 RNASEH1O60930 286 aaKnown RBP18.03■□□□□ 0.48
USP39-201ENST00000323701 ATG13O75143 517 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 FTH1P02794 183 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 PCCBP05166 539 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 HOXB2P14652 356 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 ZNF8P17098 575 aaPredicted RBP18.03■□□□□ 0.48
USP39-201ENST00000323701 MNAT1P51948 309 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 ABRQ12979 859 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 ZNF776Q68DI1 518 aaPredicted RBP18.03■□□□□ 0.48
USP39-201ENST00000323701 RALGPS2Q86X27 583 aaPredicted RBP18.03■□□□□ 0.48
USP39-201ENST00000323701 CDYL2Q8N8U2 506 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 OR56A4Q8NGH8 313 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 ACTRT2Q8TDY3 377 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 CCM2Q9BSQ5 444 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 TUBB6Q9BUF5 446 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 UBE2ZQ9H832 354 aaPredicted RBP18.03■□□□□ 0.48
USP39-201ENST00000323701 AKTIPQ9H8T0 292 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 FBXL12Q9NXK8 326 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 ARL15Q9NXU5 204 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 TMCO1Q9UM00 188 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 SLC5A10A0PJK1 596 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 NPC1O15118 1278 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 GSC2O15499 205 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 CCNT2O60583 730 aaKnown RBP18.03■□□□□ 0.48
USP39-201ENST00000323701 S100BP04271 92 aaPredicted RBP18.03■□□□□ 0.48
USP39-201ENST00000323701 CPOXP36551 454 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 GRB7Q14451 532 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 TBCCQ15814 346 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 CCSMST1Q4G0I0 132 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 CHSY3Q70JA7 882 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 RASGRP3Q8IV61 690 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 DDIASQ8IXT1 998 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 CPSF7Q8N684 471 aaKnown RBP18.03■□□□□ 0.48
USP39-201ENST00000323701 CFAP61Q8NHU2 1237 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 ZNF382Q96SR6 550 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 CD244Q9BZW8 370 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 IPPKQ9H8X2 491 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 PARVBQ9HBI1 364 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 WWOXQ9NZC7 414 aa18.03■□□□□ 0.48
USP39-201ENST00000323701 EIF3FO00303 357 aaPredicted RBP18.02■□□□□ 0.48
USP39-201ENST00000323701 GYG2O15488 501 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 AP1G1O43747 822 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 KATNA1O75449 491 aa18.02■□□□□ 0.48
USP39-201ENST00000323701 TM7SF2O76062 418 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms