RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 RRM2BQ7LG56 351 aa15.04■□□□□ -0
VARS2-201ENST00000321897 LYSMD3Q7Z3D4 306 aa15.04■□□□□ -0
VARS2-201ENST00000321897 R3HCC1LQ7Z5L2 792 aaKnown RBP15.04■□□□□ -0
VARS2-201ENST00000321897 VPS37AQ8NEZ2 397 aa15.04■□□□□ -0
VARS2-201ENST00000321897 SPPL2BQ8TCT7 592 aa15.04■□□□□ -0
VARS2-201ENST00000321897 STYXQ8WUJ0 223 aa15.04■□□□□ -0
VARS2-201ENST00000321897 DUSP12Q9UNI6 340 aa15.04■□□□□ -0
VARS2-201ENST00000321897 LOC110117498-PIK3R3F6TDL0 507 aa15.03■□□□□ -0
VARS2-201ENST00000321897 FFAR2O15552 330 aa15.03■□□□□ -0
VARS2-201ENST00000321897 COL6A2P12110 1019 aa15.03■□□□□ -0
VARS2-201ENST00000321897 SERPINA4P29622 427 aa15.03■□□□□ -0
VARS2-201ENST00000321897 PRKAG1P54619 331 aa15.03■□□□□ -0
VARS2-201ENST00000321897 C1QTNF8P60827 252 aa15.03■□□□□ -0
VARS2-201ENST00000321897 SULT2A1Q06520 285 aa15.03■□□□□ -0
VARS2-201ENST00000321897 PIGGQ5H8A4 983 aa15.03■□□□□ -0
VARS2-201ENST00000321897 PRR23CQ6ZRP0 262 aa15.03■□□□□ -0
VARS2-201ENST00000321897 SETD9Q8NE22 299 aa15.03■□□□□ -0
VARS2-201ENST00000321897 OR2T12Q8NG77 320 aa15.03■□□□□ -0
VARS2-201ENST00000321897 BRSK1Q8TDC3 778 aa15.03■□□□□ -0
VARS2-201ENST00000321897 AURKBQ96GD4 344 aaPredicted RBP15.03■□□□□ -0
VARS2-201ENST00000321897 COPS4Q9BT78 406 aa15.03■□□□□ -0
VARS2-201ENST00000321897 TMED5Q9Y3A6 229 aa15.03■□□□□ -0
VARS2-201ENST00000321897 SHANK3Q9BYB0 1731 aa15.03■□□□□ -0
VARS2-201ENST00000321897 H3BMQ9 156 aa15.03■□□□□ -0
VARS2-201ENST00000321897 IGSF6O95976 241 aa15.03■□□□□ -0
VARS2-201ENST00000321897 PGFP49763 221 aa15.03■□□□□ -0
VARS2-201ENST00000321897 IST1P53990 364 aa15.03■□□□□ -0
VARS2-201ENST00000321897 MED22Q15528 200 aa15.03■□□□□ -0
VARS2-201ENST00000321897 PLA2G4EQ3MJ16 856 aa15.03■□□□□ -0
VARS2-201ENST00000321897 SERPINA9Q86WD7 417 aa15.03■□□□□ -0
VARS2-201ENST00000321897 COG8Q96MW5 612 aa15.03■□□□□ -0
VARS2-201ENST00000321897 MTERF1Q99551 399 aaKnown RBP15.03■□□□□ -0
VARS2-201ENST00000321897 WBP11Q9Y2W2 641 aaKnown RBP15.03■□□□□ -0
VARS2-201ENST00000321897 G3V2L1 256 aa15.03■□□□□ -0
VARS2-201ENST00000321897 SDHDO14521 159 aa15.03■□□□□ -0
VARS2-201ENST00000321897 SLC7A4O43246 635 aa15.03■□□□□ -0
VARS2-201ENST00000321897 RGS14O43566 566 aa15.03■□□□□ -0
VARS2-201ENST00000321897 ANXA5P08758 320 aa15.03■□□□□ -0
VARS2-201ENST00000321897 CHI3L1P36222 383 aaPredicted RBP15.03■□□□□ -0
VARS2-201ENST00000321897 NFATC3Q12968 1075 aa15.03■□□□□ -0
VARS2-201ENST00000321897 KRR1Q13601 381 aaKnown RBP15.03■□□□□ -0
VARS2-201ENST00000321897 CILP2Q8IUL8 1156 aa15.03■□□□□ -0
VARS2-201ENST00000321897 Q8N9G6 341 aaPredicted RBP15.03■□□□□ -0
VARS2-201ENST00000321897 PANX1Q96RD7 426 aa15.03■□□□□ -0
VARS2-201ENST00000321897 HOPXQ9BPY8 73 aaPredicted RBP15.03■□□□□ -0
VARS2-201ENST00000321897 DHRS4Q9BTZ2 278 aa15.03■□□□□ -0
VARS2-201ENST00000321897 IDO1P14902 403 aa15.02■□□□□ -0
VARS2-201ENST00000321897 GPC1P35052 558 aa15.02■□□□□ -0
VARS2-201ENST00000321897 CRATP43155 626 aa15.02■□□□□ -0
VARS2-201ENST00000321897 TUBA4AP68366 448 aa15.02■□□□□ -0
VARS2-201ENST00000321897 TYW3Q6IPR3 259 aaKnown RBP15.02■□□□□ -0
VARS2-201ENST00000321897 NEK5Q6P3R8 708 aa15.02■□□□□ -0
VARS2-201ENST00000321897 TIFABQ6ZNK6 161 aa15.02■□□□□ -0
VARS2-201ENST00000321897 OR52J3Q8NH60 311 aa15.02■□□□□ -0
VARS2-201ENST00000321897 IRGQQ8WZA9 623 aa15.02■□□□□ -0
VARS2-201ENST00000321897 REXO5Q96IC2 774 aaKnown RBP15.02■□□□□ -0
VARS2-201ENST00000321897 NSMCE3Q96MG7 304 aa15.02■□□□□ -0
VARS2-201ENST00000321897 KIFC1Q9BW19 673 aa15.02■□□□□ -0
VARS2-201ENST00000321897 BEX2Q9BXY8 128 aa15.02■□□□□ -0
VARS2-201ENST00000321897 NSUN3Q9H649 340 aaKnown RBP15.02■□□□□ -0
VARS2-201ENST00000321897 TRPC4Q9UBN4 977 aa15.02■□□□□ -0
VARS2-201ENST00000321897 PRELID1Q9Y255 219 aa15.02■□□□□ -0
VARS2-201ENST00000321897 K7ERQ8 282 aa15.02■□□□□ -0
VARS2-201ENST00000321897 BCKDKO14874 412 aa15.02■□□□□ -0
VARS2-201ENST00000321897 TSPAN9O75954 239 aa15.02■□□□□ -0
VARS2-201ENST00000321897 CCT3P49368 545 aaKnown RBP15.02■□□□□ -0
VARS2-201ENST00000321897 GSK3BP49841 420 aa15.02■□□□□ -0
VARS2-201ENST00000321897 C18orf21Q32NC0 220 aaPredicted RBP15.02■□□□□ -0
VARS2-201ENST00000321897 IFNL1Q8IU54 200 aa15.02■□□□□ -0
VARS2-201ENST00000321897 ING5Q8WYH8 240 aa15.02■□□□□ -0
VARS2-201ENST00000321897 COPS8Q99627 209 aa15.02■□□□□ -0
VARS2-201ENST00000321897 TMEM245Q9H330 911 aa15.02■□□□□ -0
VARS2-201ENST00000321897 ABCB9Q9NP78 766 aa15.02■□□□□ -0
VARS2-201ENST00000321897 SLC25A13Q9UJS0 675 aa15.02■□□□□ -0
VARS2-201ENST00000321897 SAMHD1Q9Y3Z3 626 aaKnown RBP15.02■□□□□ -0
VARS2-201ENST00000321897 ARAP2Q8WZ64 1704 aa15.02■□□□□ -0
VARS2-201ENST00000321897 KRBA1A5PL33 1030 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 MLYCDO95822 493 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 FYNP06241 537 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 ZNF865P0CJ78 1059 aaPredicted RBP15.02□□□□□ -0.01
VARS2-201ENST00000321897 DGKAP23743 735 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 OPRL1P41146 370 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 CCDC149Q6ZUS6 474 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 SLC2A13Q96QE2 648 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 PADI4Q9UM07 663 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 WBP4O75554 376 aaKnown RBP15.02□□□□□ -0.01
VARS2-201ENST00000321897 PCDH8O95206 1070 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 ACRP10323 421 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 COL6A1P12109 1028 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 GTF2E2P29084 291 aaKnown RBP15.02□□□□□ -0.01
VARS2-201ENST00000321897 WASP42768 502 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 PARP15Q460N3 678 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 MSANTD2Q6P1R3 559 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 CYP4V2Q6ZWL3 525 aaPredicted RBP15.02□□□□□ -0.01
VARS2-201ENST00000321897 TRIM63Q969Q1 353 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 TMBIM1Q969X1 311 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 MYO19Q96H55 970 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 SUSD3Q96L08 255 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 OSBPL2Q9H1P3 480 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 PRDM16Q9HAZ2 1276 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms