RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 IL26Q9NPH9 171 aa17.12■□□□□ 0.33
COL9A1-201ENST00000320755 LIMD1Q9UGP4 676 aa17.12■□□□□ 0.33
COL9A1-201ENST00000320755 GBF1Q92538 1859 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 TANC1Q9C0D5 1861 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 TCF3P15923 654 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 RGS4P49798 205 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 HPCAP84074 193 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 TRAF3Q13114 568 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 CPSF6Q16630 551 aaKnown RBP eCLIP17.11■□□□□ 0.33
COL9A1-201ENST00000320755 SLC8B1Q6J4K2 584 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 TMCO2Q7Z6W1 182 aaPredicted RBP17.11■□□□□ 0.33
COL9A1-201ENST00000320755 HS3ST5Q8IZT8 346 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 OSCP1Q8WVF1 389 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 C12orf43Q96C57 262 aaKnown RBP17.11■□□□□ 0.33
COL9A1-201ENST00000320755 ISOC1Q96CN7 298 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 VN1R3Q9BXE9 311 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 SEZ6LQ9BYH1 1024 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 FAM126AQ9BYI3 521 aaPredicted RBP17.11■□□□□ 0.33
COL9A1-201ENST00000320755 OPTCQ9UBM4 332 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 UTS2RQ9UKP6 389 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 PQBP1O60828 265 aaKnown RBP17.11■□□□□ 0.33
COL9A1-201ENST00000320755 UMPSP11172 480 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 COL6A1P12109 1028 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 CHRNB3Q05901 458 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 GTDC1Q4AE62 458 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 SPANXN4Q5MJ08 99 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 ENPP6Q6UWR7 440 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 PROSER1Q86XN7 944 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 LRRC43Q8N309 656 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 PIH1D2Q8WWB5 315 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 GAB3Q8WWW8 586 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 IKZF5Q9H5V7 419 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 ELAC1Q9H777 363 aaKnown RBP17.11■□□□□ 0.33
COL9A1-201ENST00000320755 PCDH10Q9P2E7 1040 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 MTRRQ9UBK8 725 aa17.11■□□□□ 0.33
COL9A1-201ENST00000320755 LOC730098B7Z3J9 87 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 CA8P35219 290 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 ZXDBP98169 803 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 PCBP2Q15366 365 aaKnown RBP eCLIP17.1■□□□□ 0.33
COL9A1-201ENST00000320755 CHRNA6Q15825 494 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 MAPKAPK3Q16644 382 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 ANKRD34AQ69YU3 496 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 TSPAN33Q86UF1 283 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 ITIH5Q86UX2 942 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 PHACTR4Q8IZ21 702 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 LIX1Q8N485 282 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 GOLM1Q8NBJ4 401 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 ZBTB18Q99592 522 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 DPY30Q9C005 99 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 NAA50Q9GZZ1 169 aaKnown RBP17.1■□□□□ 0.33
COL9A1-201ENST00000320755 ING2Q9H160 280 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 ADNPQ9H2P0 1102 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 HEBP1Q9NRV9 189 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 PKD2L2Q9NZM6 624 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 ZNF490Q9ULM2 529 aaPredicted RBP17.1■□□□□ 0.33
COL9A1-201ENST00000320755 H7C0S8 307 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 ULK1O75385 1050 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 KCNH1O95259 989 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 PGLSO95336 258 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 GSNP06396 782 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 MTHFRP42898 656 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 BCL2L1Q07817 233 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 NFATC2Q13469 925 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 ZBED5Q49AG3 693 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 LRRC73Q5JTD7 316 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 KCTD8Q6ZWB6 473 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 PATL1Q86TB9 770 aaKnown RBP17.1■□□□□ 0.33
COL9A1-201ENST00000320755 OR2T12Q8NG77 320 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 AURKBQ96GD4 344 aaPredicted RBP17.1■□□□□ 0.33
COL9A1-201ENST00000320755 NPLQ9BXD5 320 aaPredicted RBP17.1■□□□□ 0.33
COL9A1-201ENST00000320755 MUC13Q9H3R2 512 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 NTN4Q9HB63 628 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 SRRDQ9UH36 339 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 YIPF1Q9Y548 306 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 GNGT2O14610 69 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 NOBOXO60393 691 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 ANXA6P08133 673 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 ITGALP20701 1170 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 HNF1BP35680 557 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 TMED1Q13445 227 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 PWP1Q13610 501 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 FAM98BQ52LJ0 330 aaKnown RBP17.1■□□□□ 0.33
COL9A1-201ENST00000320755 GCNT7Q6ZNI0 430 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 DNAJB7Q7Z6W7 309 aaPredicted RBP17.1■□□□□ 0.33
COL9A1-201ENST00000320755 NAT16Q8N8M0 369 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 ZNF461Q8TAF7 563 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 SLC13A3Q8WWT9 602 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 ABTB1Q969K4 478 aaPredicted RBP17.1■□□□□ 0.33
COL9A1-201ENST00000320755 NCLNQ969V3 563 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 ISG20Q96AZ6 181 aaKnown RBP17.1■□□□□ 0.33
COL9A1-201ENST00000320755 ZNF583Q96ND8 569 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 CWH43Q9H720 699 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 CARS2Q9HA77 564 aaKnown RBP17.1■□□□□ 0.33
COL9A1-201ENST00000320755 SMURF2Q9HAU4 748 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 MAGEE1Q9HCI5 957 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 MAGEL2Q9UJ55 1249 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 CLEC4EQ9ULY5 219 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 EIF3LQ9Y262 564 aaKnown RBP17.1■□□□□ 0.33
COL9A1-201ENST00000320755 PCDHB3Q9Y5E6 796 aa17.1■□□□□ 0.33
COL9A1-201ENST00000320755 PCDHB1Q9Y5F3 818 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms