RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 IGLV3-16A0A075B6K0 115 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 CCDC154A6NI56 674 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 NME4O00746 187 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 ZNF197O14709 1029 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 SLC9A3R1O14745 358 aaPredicted RBP7.43□□□□□ -1.22
IFT88-201ENST00000319980 CASQ2O14958 399 aaPredicted RBP7.43□□□□□ -1.22
IFT88-201ENST00000319980 ATP1B2P14415 290 aaPredicted RBP7.43□□□□□ -1.22
IFT88-201ENST00000319980 XPAP23025 273 aaPredicted RBP7.43□□□□□ -1.22
IFT88-201ENST00000319980 DGKGP49619 791 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 GRIK2Q13002 908 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 AP5B1Q2VPB7 878 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 RFTN2Q52LD8 501 aaPredicted RBP7.43□□□□□ -1.22
IFT88-201ENST00000319980 SGO1Q5FBB7 561 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 IL23RQ5VWK5 629 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 IRGCQ6NXR0 463 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 SERPINA13PQ6UXR4 307 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 VRK3Q8IV63 474 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 SLC15A3Q8IY34 581 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 PROKR1Q8TCW9 393 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 LRRC58Q96CX6 371 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 ZFYVE19Q96K21 471 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 PKP2Q99959 881 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 GPATCH1Q9BRR8 931 aaKnown RBP7.43□□□□□ -1.22
IFT88-201ENST00000319980 SLC52A3Q9NQ40 469 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 FARSBQ9NSD9 589 aaKnown RBP7.43□□□□□ -1.22
IFT88-201ENST00000319980 GID8Q9NWU2 228 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 DUS2Q9NX74 493 aaKnown RBP7.43□□□□□ -1.22
IFT88-201ENST00000319980 SLAMF8Q9P0V8 285 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 KLHL42Q9P2K6 505 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 SUN2Q9UH99 717 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 RWDD3Q9Y3V2 267 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 ST14Q9Y5Y6 855 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 PTPRSQ13332 1948 aa7.43□□□□□ -1.22
IFT88-201ENST00000319980 KIAA1671Q9BY89 1806 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 OR2AG2A6NM03 316 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 LOC730098B7Z3J9 87 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 K7EPI3 171 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 FXYD1O00168 92 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 LSM1O15116 133 aaKnown RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 STK16O75716 305 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 RNASEH2AO75792 299 aaKnown RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 CYP17A1P05093 508 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 ANXA5P08758 320 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 CBSLP0DN79 551 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 G6PDP11413 515 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 TIMP2P16035 220 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 EPB42P16452 691 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 ZNF30P17039 623 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 SLC6A2P23975 617 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 CBSP35520 551 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 POLR2JP52435 117 aaKnown RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 MRPS35P82673 323 aaKnown RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 RHDQ02161 417 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 MESP2Q0VG99 397 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 NFYCQ13952 458 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 TIGD2Q4W5G0 525 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 PAGE3Q5JUK9 113 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 C6orf10Q5SRN2 563 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 ZNF648Q5T619 568 aaPredicted RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 TMEM154Q6P9G4 183 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 UBE2R2Q712K3 238 aaPredicted RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 KIAA0907Q7Z7F0 614 aaPredicted RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 C12orf40Q86WS4 652 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 DHFR2Q86XF0 187 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 PLPP6Q8IY26 295 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 CELF5Q8N6W0 485 aaKnown RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 BEND7Q8N7W2 519 aaPredicted RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 NUDT8Q8WV74 236 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 SMG7Q92540 1137 aaKnown RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 ULK4Q96C45 1275 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 GDF15Q99988 308 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 SLC2A11Q9BYW1 496 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 BRINP2Q9C0B6 783 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 CERS4Q9HA82 394 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 RDH14Q9HBH5 336 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 ZDHHC7Q9NXF8 308 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 MARK1Q9P0L2 795 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 KLQ9UEF7 1012 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 IL36AQ9UHA7 158 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 EGFL7Q9UHF1 273 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 ZNHIT2Q9UHR6 403 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 PDE10AQ9Y233 779 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 RNF11Q9Y3C5 154 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 AP4S1Q9Y587 144 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 KRT87PA6NCN2 255 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 SOBPA7XYQ1 873 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 UPK3BL1B0FP48 263 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 UPK3BL2E5RIL1 263 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 C5orf67F2Z3F1 127 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 ULK1O75385 1050 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 STAMBPO95630 424 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 CA3P07451 260 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 UBTFL6P0CB48 400 aaPredicted RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 CYP2A6P11509 494 aaPredicted RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 ADH5P11766 374 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 AOAHP28039 575 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 IL12AP29459 219 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 VIPR1P32241 457 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 SOX11P35716 441 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 ZFP36L2P47974 494 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms