RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 GIN1Q9NXP7 522 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 MARCH2Q9P0N8 246 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 LIMD1Q9UGP4 676 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 PADI3Q9ULW8 664 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 ARIH1Q9Y4X5 557 aaPredicted RBP18.79■□□□□ 0.6
RTN4-201ENST00000317610 COMMD10Q9Y6G5 202 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 SCN10AQ9Y5Y9 1956 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 LOC100130705A0A1B0GUX0 176 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 PFDN6O15212 129 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 SLC16A6O15403 523 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 PRLP01236 227 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 CCDC159P0C7I6 412 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 MSH3P20585 1137 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 OCA2Q04671 838 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 PIGFQ07326 219 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 TRIM16LQ309B1 348 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 MIB1Q86YT6 1006 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 KLHDC9Q8NEP7 349 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 OR4F6Q8NGB9 312 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 ZBED2Q9BTP6 218 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 DGCR6LQ9BY27 220 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 MAGIXQ9H6Y5 334 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 HMG20AQ9NP66 347 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 RNF181Q9P0P0 153 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 EVLQ9UI08 416 aaPredicted RBP18.79■□□□□ 0.6
RTN4-201ENST00000317610 C3orf18Q9UK00 162 aa18.79■□□□□ 0.6
RTN4-201ENST00000317610 TNPO3Q9Y5L0 923 aaKnown RBP18.79■□□□□ 0.6
RTN4-201ENST00000317610 INMTO95050 263 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 GABARAPO95166 117 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 OAZ2O95190 189 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 CD52P31358 61 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 CCL14Q16627 93 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 ZC3H12BQ5HYM0 836 aaKnown RBP18.78■□□□□ 0.6
RTN4-201ENST00000317610 ANKRD34AQ69YU3 496 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 SERINC5Q86VE9 423 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 MSRB3Q8IXL7 192 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 OR10A6Q8NH74 314 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 PDLIM5Q96HC4 596 aaKnown RBP18.78■□□□□ 0.6
RTN4-201ENST00000317610 PPP3R2Q96LZ3 170 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 UTS2RQ9UKP6 389 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 ACTL7AQ9Y615 435 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 DGKBQ9Y6T7 804 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 ELOVL7A1L3X0 281 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 KRBA1A5PL33 1030 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 ZNF99A8MXY4 864 aaPredicted RBP18.78■□□□□ 0.6
RTN4-201ENST00000317610 XYLBO75191 536 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 NDUFS2O75306 463 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 RETP07949 1114 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 CR2P20023 1033 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 LPOP22079 712 aaPredicted RBP18.78■□□□□ 0.6
RTN4-201ENST00000317610 DCTP40126 519 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 HALP42357 657 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 RGRP47804 291 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 NRIP1P48552 1158 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 RING1Q06587 406 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 ABRAXAS2Q15018 415 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 NFE2Q16621 373 aaPredicted RBP18.78■□□□□ 0.6
RTN4-201ENST00000317610 SMU1Q2TAY7 513 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 C5orf22Q49AR2 442 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 LDLRAP1Q5SW96 308 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 BTLAQ7Z6A9 289 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 ADHFE1Q8IWW8 467 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 MINDY2Q8NBR6 621 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 TAMM41Q96BW9 452 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 RMDN1Q96DB5 314 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 IKZF5Q9H5V7 419 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 SLC27A5Q9Y2P5 690 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 AP3M1Q9Y2T2 418 aa18.78■□□□□ 0.6
RTN4-201ENST00000317610 A0A0D9SEW6 157 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 SLC12A8A0AV02 714 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 MYADML2A6NDP7 307 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 M0QX08 132 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 CXCR6O00574 342 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 IL1RNP18510 177 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 TACR2P21452 398 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 ACVR2AP27037 513 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 MC4RP32245 332 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 GRK4P32298 578 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 RAD23AP54725 363 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 TRAF3Q13114 568 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 LAPTM5Q13571 262 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 ACOX1Q15067 660 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 SPESP1Q6UW49 350 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 RNF165Q6ZSG1 346 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 PIWIL3Q7Z3Z3 882 aaKnown RBP18.77■□□□□ 0.6
RTN4-201ENST00000317610 GPR149Q86SP6 731 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 CARNMT1Q8N4J0 409 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 S100ZQ8WXG8 99 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 HBEGFQ99075 208 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 ZBTB18Q99592 522 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 ATAD3AQ9NVI7 634 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 SLC25A37Q9NYZ2 338 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 TMEFF2Q9UIK5 374 aaPredicted RBP18.77■□□□□ 0.6
RTN4-201ENST00000317610 FKBPLQ9UIM3 349 aa18.77■□□□□ 0.6
RTN4-201ENST00000317610 INPPL1O15357 1258 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 INSIG1O15503 277 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 PRKD3O94806 890 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 HMBSP08397 361 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 AKT1P31749 480 aa18.77■□□□□ 0.59
RTN4-201ENST00000317610 MAGEA11P43364 429 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms