RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 CADM3Q8N126 398 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 CLEC4FQ8N1N0 589 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 LEMD2Q8NC56 503 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 PTERQ96BW5 349 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 NSUN5Q96P11 429 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 MUC13Q9H3R2 512 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 ENTPD7Q9NQZ7 604 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 HCFC1R1Q9NWW0 138 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 ARHGEF15O94989 841 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 MMP2P08253 660 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 GSTM2P28161 218 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 LEPRP48357 1165 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 HTRA4P83105 476 aaPredicted RBP16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 HPS1Q92902 700 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 MAGED4Q96JG8 741 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 TEX37Q96LM6 180 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 HMG20AQ9NP66 347 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 SLC52A3Q9NQ40 469 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 SLAMF8Q9P0V8 285 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 SZT2Q5T011 3432 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 DYTNA2CJ06 578 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 CCL22O00626 93 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 TOR1BO14657 336 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 XYLBO75191 536 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 OXSR1O95747 527 aaPredicted RBP16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 SLC4A1P02730 911 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 TCF3P15923 654 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 PPM1AP35813 382 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 KCNK10P57789 538 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 BCL2A1Q16548 175 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 THAP5Q7Z6K1 395 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 ADAMTS19Q8TE59 1207 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 OVCA2Q8WZ82 227 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 TRMT2BQ96GJ1 504 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 CDK5RAP1Q96SZ6 601 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 LTB4R2Q9NPC1 389 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 RBMX2Q9Y388 322 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 INSL6Q9Y581 213 aa16.93■□□□□ 0.3
SCAMP4-201ENST00000316097 A0A1W2PP18 115 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 A0A1W2PRU2 124 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 ASPDHA6ND91 283 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 CCL16O15467 120 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 TLL1O43897 1013 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 THRBP10828 461 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 HRH2P25021 359 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 ALDH3A2P51648 485 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 TPD52P55327 224 aaPredicted RBP16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 AASDHQ4L235 1098 aaPredicted RBP16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 ADGRF1Q5T601 910 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 FRA10AC1Q70Z53 315 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 STK32CQ86UX6 486 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 KIAA2013Q8IYS2 634 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 FKBP10Q96AY3 582 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 C17orf80Q9BSJ5 609 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 NTN4Q9HB63 628 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 DOCK6Q96HP0 2047 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 RFPL2O75678 378 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 C8AP07357 584 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 PCNAP12004 261 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 DAG1Q14118 895 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 SKIV2LQ15477 1246 aaKnown RBP16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 SLC14A2Q15849 920 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 LINGO4Q6UY18 593 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 RANBP10Q6VN20 620 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 C8orf59Q8N0T1 100 aaPredicted RBP16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 PARP8Q8N3A8 854 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 CALML6Q8TD86 181 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 TMBIM1Q969X1 311 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 IMP4Q96G21 291 aaKnown RBP16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 NSMCE3Q96MG7 304 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 SEMA3CQ99985 751 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 PRKD2Q9BZL6 878 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 HPS4Q9NQG7 708 aa16.92■□□□□ 0.3
SCAMP4-201ENST00000316097 GRXCR1A8MXD5 290 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 CBX4O00257 560 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 JRKO75564 520 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 HTR1BP28222 390 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 CBX2Q14781 532 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 PFKFB4Q16877 469 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 PARP15Q460N3 678 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 COQ5Q5HYK3 327 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 RBM48Q5RL73 367 aaKnown RBP16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 KANK2Q63ZY3 851 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 KDELC1Q6UW63 502 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 SLC16A12Q6ZSM3 486 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 CCDC117Q8IWD4 279 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 ARRDC2Q8TBH0 407 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 BPIFB1Q8TDL5 484 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 SLC25A51Q9H1U9 297 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 INTS7Q9NVH2 962 aaKnown RBP16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 FNIP2Q9P278 1114 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 UXTQ9UBK9 157 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 ANKRD12Q6UB98 2062 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 UBXN8O00124 270 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 FGF4P08620 206 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 PIRTP0C851 137 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 HOXD9P28356 352 aaPredicted RBP16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 CTNNB1P35222 781 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 RGRP47804 291 aa16.91■□□□□ 0.3
SCAMP4-201ENST00000316097 OR4D2P58180 307 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms