RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 DEFB119Q8N690 84 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 PPM1NQ8N819 430 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 TSTD1Q8NFU3 115 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 ACTRT2Q8TDY3 377 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 C2orf15Q8WU43 125 aaKnown RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 FAM172AQ8WUF8 416 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 WDR60Q8WVS4 1066 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 KBTBD7Q8WVZ9 684 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 SREK1Q8WXA9 508 aaKnown RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 RXFP2Q8WXD0 754 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 HSPH1Q92598 858 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 MRPS31Q92665 395 aaKnown RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CDKL2Q92772 493 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CMTM5Q96DZ9 223 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 MRRFQ96E11 262 aaKnown RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 P2RY11Q96G91 374 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CAMK1GQ96NX5 476 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 BBC3Q96PG8 261 aaPredicted RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 GBP5Q96PP8 586 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 QKIQ96PU8 341 aaKnown RBP eCLIP4.88□□□□□ -1.632e-10■■■■■ 36
CKS1B-201ENST00000308987 GCNAQ96QF7 691 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 TSPAN18Q96SJ8 248 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 KLF6Q99612 283 aaPredicted RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 FERMT1Q9BQL6 677 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CENPKQ9BS16 269 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 DNAI2Q9GZS0 605 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 PLAC1Q9HBJ0 212 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 TRPC7Q9HCX4 862 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 S100A14Q9HCY8 104 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 DMAP1Q9NPF5 467 aaPredicted RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CD93Q9NPY3 652 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 MRGBPQ9NV56 204 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 HACD3Q9P035 362 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 CPSF2Q9P2I0 782 aaKnown RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 SAE1Q9UBE0 346 aaPredicted RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 MYOTQ9UBF9 498 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 PCSK1NQ9UHG2 260 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 SLC7A8Q9UHI5 535 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 BCAP29Q9UHQ4 241 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 EVLQ9UI08 416 aaPredicted RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 TMEFF2Q9UIK5 374 aaPredicted RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 MID2Q9UJV3 735 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 PILRBQ9UKJ0 227 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 DSEQ9UL01 958 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 MMP17Q9ULZ9 603 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 ARHGAP26Q9UNA1 814 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 MSRB2Q9Y3D2 182 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 COMMD3-BMI1R4GMX3 469 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 KIF26BQ2KJY2 2108 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 NYNRINQ9P2P1 1898 aaKnown RBP4.88□□□□□ -1.63
CKS1B-201ENST00000308987 FLNCQ14315 2725 aa4.88□□□□□ -1.63
CKS1B-201ENST00000308987 SPTA1P02549 2419 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PTPN13Q12923 2485 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 MUC22E2RYF6 1773 aaPredicted RBP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 A0A088AWK7 358 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 TRAV19A0A0A6YYK7 116 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 TMEM8BA6NDV4 472 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 TMEM114B3SHH9 223 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 E5RJQ4 531 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 M0QYV0 167 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 LEFTY2O00292 366 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 KCNN4O15554 427 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PLIN3O60664 434 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 GJB3O75712 270 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 RTN3O95197 1032 aaPredicted RBP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 KLF8O95600 359 aaPredicted RBP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 CNOT4O95628 575 aaKnown RBP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 OLFM2O95897 454 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 GSRP00390 522 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 APOA4P06727 396 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 ENO1P06733 434 aaKnown RBP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 CD48P09326 243 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PABPC4LP0CB38 370 aaKnown RBP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 HDCP19113 662 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 BDNFP23560 247 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PAX3P23760 479 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 RBL1P28749 1068 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 SDC4P31431 198 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 HADHAP40939 763 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 GARSP41250 739 aaKnown RBP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 MAGEA12P43365 314 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 RPL34P49207 117 aaKnown RBP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 HARS2P49590 506 aaKnown RBP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 NUMBP49757 651 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PGFP49763 221 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 COPAP53621 1224 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 RBP5P82980 135 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 TSPY1Q01534 308 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 SLC6A3Q01959 620 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 DEUP1Q05D60 604 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 NIPAL4Q0D2K0 466 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 SMARCB1Q12824 385 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 TUBB3Q13509 450 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 DHCR24Q15392 516 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 TAF12Q16514 161 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 DPYSL2Q16555 572 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PRSS53Q2L4Q9 553 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 SMTNL2Q2TAL5 461 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 CCDC153Q494R4 210 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 KCNT1Q5JUK3 1230 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms