RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 PRDM8Q9NQV8 689 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 PCDHGA10Q9Y5H3 936 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 FUOMA2VDF0 154 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 OR51F1A6NGY5 319 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 QSOX1O00391 747 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 CLDN11O75508 207 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 PGRP06401 933 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 ELK4P28324 431 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 OR2T5Q6IEZ7 315 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 DOK6Q6PKX4 331 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 DENND1CQ8IV53 801 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 GPR65Q8IYL9 337 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 ZBTB2Q8N680 514 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 OR2T29Q8NH02 315 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 TMIGD2Q96BF3 282 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 PPCDCQ96CD2 204 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 CDCA5Q96FF9 252 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 MAGEB17A8MXT2 336 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 SOCS2O14508 198 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 IRAK2O43187 625 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 ANXA8P13928 327 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 RFC2P35250 354 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 SLC15A1P46059 708 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 TUSC3Q13454 348 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 DPY19L1Q2PZI1 675 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 B3GNT9Q6UX72 402 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 RPS27LQ71UM5 84 aaKnown RBP19.03■□□□□ 0.64
USP48-201ENST00000308271 SIDT2Q8NBJ9 832 aaKnown RBP19.03■□□□□ 0.64
USP48-201ENST00000308271 ZNF607Q96SK3 696 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 SORT1Q99523 831 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 FNDC11Q9BVV2 318 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 NFKBIZQ9BYH8 718 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 PRORSD1PA6NEY8 169 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 C8orf48Q96LL4 319 aa19.03■□□□□ 0.64
USP48-201ENST00000308271 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.03■□□□□ 0.64
USP48-201ENST00000308271 RBM47A0AV96 593 aaKnown RBP19.02■□□□□ 0.64
USP48-201ENST00000308271 PLSCR1O15162 318 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 AKR1A1P14550 325 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 MAPKAPK2P49137 400 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 BEX3Q00994 111 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 RELAQ04206 551 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 SRSF11Q05519 484 aaKnown RBP19.02■□□□□ 0.64
USP48-201ENST00000308271 TGM3Q08188 693 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 USP39Q53GS9 565 aaKnown RBP19.02■□□□□ 0.64
USP48-201ENST00000308271 DPY19L2P1Q6NXN4 242 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 PGM2L1Q6PCE3 622 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 UXS1Q8NBZ7 420 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 KCNS3Q9BQ31 491 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 MIOSQ9NXC5 875 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 MAGEA6P43360 314 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 DGKQP52824 942 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 OR52J3Q8NH60 311 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 GAB3Q8WWW8 586 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 GALPQ9UBC7 116 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 TESMINQ9Y4I5 508 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 PCDHGB3Q9Y5G1 929 aa19.02■□□□□ 0.64
USP48-201ENST00000308271 ILVBLA1L0T0 632 aa19.02■□□□□ 0.63
USP48-201ENST00000308271 PER2O15055 1255 aa19.02■□□□□ 0.63
USP48-201ENST00000308271 SNRPD1P62314 119 aaKnown RBP19.02■□□□□ 0.63
USP48-201ENST00000308271 PFKPQ01813 784 aa19.02■□□□□ 0.63
USP48-201ENST00000308271 TECRLQ5HYJ1 363 aa19.02■□□□□ 0.63
USP48-201ENST00000308271 CYP2U1Q7Z449 544 aa19.02■□□□□ 0.63
USP48-201ENST00000308271 TEX47Q8TBZ9 253 aa19.02■□□□□ 0.63
USP48-201ENST00000308271 MMP27Q9H306 513 aa19.02■□□□□ 0.63
USP48-201ENST00000308271 ABCB9Q9NP78 766 aa19.02■□□□□ 0.63
USP48-201ENST00000308271 SLC30A4O14863 429 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 HPRP00739 348 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 PPP1R8Q12972 351 aaKnown RBP19.01■□□□□ 0.63
USP48-201ENST00000308271 KRT74Q7RTS7 529 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 PCSK9Q8NBP7 692 aaKnown RBP19.01■□□□□ 0.63
USP48-201ENST00000308271 ZNF597Q96LX8 424 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 TCF25Q9BQ70 676 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 CNPPD1Q9BV87 410 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 ZFYVE1Q9HBF4 777 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 FNIP2Q9P278 1114 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 LYVE1Q9Y5Y7 322 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 CEPT1Q9Y6K0 416 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 G3V2L1 256 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 SCAMP3O14828 347 aaKnown RBP19.01■□□□□ 0.63
USP48-201ENST00000308271 CDH12P55289 794 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 GCNT6Q5T4J0 391 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 NUDT18Q6ZVK8 323 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 TP53INP1Q96A56 240 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 CRELD1Q96HD1 420 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 AMBNQ9NP70 447 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 ISPDA4D126 451 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 IFNW1P05000 195 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 YES1P07947 543 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 HTR1EP28566 365 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 RPIAP49247 311 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 IL18Q14116 193 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 GNA13Q14344 377 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 TAF1AQ15573 450 aaPredicted RBP19.01■□□□□ 0.63
USP48-201ENST00000308271 DDI2Q5TDH0 399 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 NANOGP8Q6NSW7 305 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 DEF8Q6ZN54 512 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 METTL3Q86U44 580 aaKnown RBP19.01■□□□□ 0.63
USP48-201ENST00000308271 CFAP52Q8N1V2 620 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 MAGEH1Q9H213 219 aa19.01■□□□□ 0.63
USP48-201ENST00000308271 NANOGQ9H9S0 305 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms