RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 BCO2Q9BYV7 579 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SYT4Q9H2B2 425 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 NARSO43776 548 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 PEX11AO75192 247 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CNTN5O94779 1100 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 EPHA10Q5JZY3 1008 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 PET117Q6UWS5 81 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 C17orf64Q86WR6 236 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CBWD2Q8IUF1 395 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 FSTL5Q8N475 847 aaPredicted RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 PRCCQ92733 491 aaPredicted RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 ISG20Q96AZ6 181 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 KCTD7Q96MP8 289 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 ASAH2Q9NR71 780 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 FAM86C1Q9NVL1 165 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 GPRC5BQ9NZH0 403 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 FLRT1Q9NZU1 646 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 GMPPBQ9Y5P6 360 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 NR2E3Q9Y5X4 410 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 MEIS2O14770 477 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 FGF4P08620 206 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CDH1P12830 882 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CBWD3Q5JTY5 395 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CBWD5Q5RIA9 395 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 KIAA1211LQ6NV74 962 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 KLHL17Q6TDP4 642 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 OFCC1Q8IZS5 231 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 KBTBD7Q8WVZ9 684 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 BTBD1Q9H0C5 482 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 TPK1Q9H3S4 243 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 MLXIPLQ9NP71 852 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 PCSK1NQ9UHG2 260 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SLC22A7Q9Y694 548 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 DCXO43602 365 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 MMP2P08253 660 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 UGT1A3P35503 534 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 IGFALSP35858 605 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 APLP1P51693 650 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 TRA2BP62995 288 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 EFR3AQ14156 821 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 MGAT5BQ3V5L5 792 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 ZFP69Q49AA0 526 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 C5orf22Q49AR2 442 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 IQCCQ4KMZ1 466 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 AGKQ53H12 422 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 PGM2L1Q6PCE3 622 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SNX20Q7Z614 316 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CDRT15Q96T59 188 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SEMA4AQ9H3S1 761 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 SCP2D1Q9UJQ7 156 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 PDE10AQ9Y233 779 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SMLR1H3BR10 107 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 AP5Z1O43299 807 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CKMT1AP12532 417 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CDKN2BP42772 138 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 RPL21P46778 160 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 LIMK1P53667 647 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 PPP3R1P63098 170 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 ZYXQ15942 572 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 FNBP1LQ5T0N5 605 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 AIFM2Q9BRQ8 373 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 COPS4Q9BT78 406 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 NELFAQ9H3P2 528 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SMOC2Q9H3U7 446 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 LIMD1Q9UGP4 676 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 A0A1W2PRB8 838 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 BTBD17A6NE02 478 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 POLRMTO00411 1230 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 PLOD2O00469 737 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 AZIN1O14977 448 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 PGK1P00558 417 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 GRIA3P42263 894 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 FSTL1Q12841 308 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 TUSC3Q13454 348 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CTXN3Q4LDR2 81 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 MDM1Q8TC05 714 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 C7orf43Q8WVR3 580 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 AGAP3Q96P47 875 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 PNKPQ96T60 521 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 PHB2Q99623 299 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SNX15Q9NRS6 342 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 MED17Q9NVC6 651 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SRP68Q9UHB9 627 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 CDH10Q9Y6N8 788 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 KCPQ6ZWJ8 1503 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 GNB5O14775 395 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 CHRNGP07510 517 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 ALDH3A2P51648 485 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 SLC18A2Q05940 514 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 ABHD18Q0P651 414 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 ST3GAL3Q11203 375 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 FAM199XQ6PEV8 388 aaPredicted RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 CCDC81Q6ZN84 652 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 TMEM199Q8N511 208 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 OXER1Q8TDS5 423 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 RAD51AP1Q96B01 352 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 DYNLL2Q96FJ2 89 aa3.96□□□□□ -1.78
USH2A-201ENST00000307340 TDRD3Q9H7E2 651 aaKnown RBP3.96□□□□□ -1.78
USH2A-201ENST00000307340 NMRK2Q9NPI5 230 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms