RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 AFTPHQ6ULP2 937 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 CERS6Q6ZMG9 384 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 CREG2Q8IUH2 290 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 PLXDC1Q8IUK5 500 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 RASGRP3Q8IV61 690 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 VRK3Q8IV63 474 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 CCDC89Q8N998 374 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 NAT8LQ8N9F0 302 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 MFSD3Q96ES6 412 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 PPM1MQ96MI6 270 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 TTC25Q96NG3 672 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 BIRC8Q96P09 236 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 WDR83Q9BRX9 315 aaKnown RBP10.97□□□□□ -0.65
CLCC1-201ENST00000302500 CCM2Q9BSQ5 444 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 AP1M1Q9BXS5 423 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 PITPNM3Q9BZ71 974 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 IL22Q9GZX6 179 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 HOMER3Q9NSC5 361 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 SYBUQ9NX95 663 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 SOX13Q9UN79 622 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 TENM4Q6N022 2769 aa10.97□□□□□ -0.65
CLCC1-201ENST00000302500 ZCWPW2A0A1B0GU75 182 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 TEX51A0A1B0GUA7 166 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 EFCAB7A8K855 629 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 AGRPO00253 132 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 ATXN7O15265 892 aaPredicted RBP10.96□□□□□ -0.65
CLCC1-201ENST00000302500 MSL3P1P0C860 447 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 FGF5P12034 268 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 PBLDP30039 288 aaPredicted RBP10.96□□□□□ -0.65
CLCC1-201ENST00000302500 CCR7P32248 378 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 PREPP48147 710 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 GABRA4P48169 554 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 KPNA2P52292 529 aaKnown RBP10.96□□□□□ -0.65
CLCC1-201ENST00000302500 MAPK10P53779 464 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 UCNP55089 124 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 RAB15P59190 212 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 VAC14Q08AM6 782 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 ZRANB3Q5FWF4 1079 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 CTSL3PQ5NE16 218 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 ZNF517Q6ZMY9 492 aaPredicted RBP10.96□□□□□ -0.65
CLCC1-201ENST00000302500 NLRP9Q7RTR0 991 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 GPR155Q7Z3F1 870 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 LDB1Q86U70 411 aaPredicted RBP10.96□□□□□ -0.65
CLCC1-201ENST00000302500 TMEM135Q86UB9 458 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 CFAP206Q8IYR0 622 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 ADGRF3Q8IZF5 1079 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 MCUQ8NE86 351 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 OR4L1Q8NH43 312 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 C12orf66Q96MD2 445 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 CCNL2Q96S94 520 aaPredicted RBP10.96□□□□□ -0.65
CLCC1-201ENST00000302500 SLC12A9Q9BXP2 914 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 TFB2MQ9H5Q4 396 aaKnown RBP10.96□□□□□ -0.65
CLCC1-201ENST00000302500 STN1Q9H668 368 aaKnown RBP10.96□□□□□ -0.65
CLCC1-201ENST00000302500 IMP3Q9NV31 184 aaKnown RBP10.96□□□□□ -0.65
CLCC1-201ENST00000302500 POMT2Q9UKY4 750 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 BTRCQ9Y297 605 aa10.96□□□□□ -0.65
CLCC1-201ENST00000302500 A8MU76 341 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 STMND1H3BQB6 276 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 PGRMC1O00264 195 aaKnown RBP10.95□□□□□ -0.66
CLCC1-201ENST00000302500 BTN3A3O00478 584 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 PHF2O75151 1096 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 SLCO2B1O94956 709 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 PTMAP06454 111 aaKnown RBP10.95□□□□□ -0.66
CLCC1-201ENST00000302500 MLNP12872 115 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 FOLR1P15328 257 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 RPS3P23396 243 aaKnown RBP eCLIP10.95□□□□□ -0.66
CLCC1-201ENST00000302500 MGAT1P26572 445 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 PEBP1P30086 187 aaKnown RBP10.95□□□□□ -0.66
CLCC1-201ENST00000302500 CSTF2P33240 577 aaKnown RBP eCLIP10.95□□□□□ -0.66
CLCC1-201ENST00000302500 HALP42357 657 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 NPY2RP49146 381 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 FNTAP49354 379 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 ADARP55265 1226 aaKnown RBP10.95□□□□□ -0.66
CLCC1-201ENST00000302500 CBLBQ13191 982 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 MAP7Q14244 749 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 TRIP13Q15645 432 aaPredicted RBP10.95□□□□□ -0.66
CLCC1-201ENST00000302500 LINC00303Q3SY05 128 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 RNASEH2BQ5TBB1 312 aaKnown RBP10.95□□□□□ -0.66
CLCC1-201ENST00000302500 CCDC137Q6PK04 289 aaKnown RBP10.95□□□□□ -0.66
CLCC1-201ENST00000302500 NAPRTQ6XQN6 538 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 LRRC69Q6ZNQ3 347 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 SLC22A15Q8IZD6 547 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 D2HGDHQ8N465 521 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 DNAAF3Q8N9W5 541 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 LSM14AQ8ND56 463 aaKnown RBP10.95□□□□□ -0.66
CLCC1-201ENST00000302500 OR52E1Q8NGJ3 308 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 LPGAT1Q92604 370 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 CXorf40BQ96DE9 158 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 SIGLEC10Q96LC7 697 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 SERPINB12Q96P63 405 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 TGM7Q96PF1 710 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 TEFMQ96QE5 360 aaKnown RBP10.95□□□□□ -0.66
CLCC1-201ENST00000302500 MAP3K3Q99759 626 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 SEMA4CQ9C0C4 833 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 PCYOX1Q9UHG3 505 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 ICKQ9UPZ9 632 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 PCDHGA4Q9Y5G9 962 aa10.95□□□□□ -0.66
CLCC1-201ENST00000302500 HEATR5BQ9P2D3 2071 aa10.94□□□□□ -0.66
CLCC1-201ENST00000302500 TLCD2A6NGC4 264 aa10.94□□□□□ -0.66
CLCC1-201ENST00000302500 IQCF5A8MTL0 148 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms