RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 GP2P55259 537 aaKnown RBP14.65□□□□□ -0.06
SPIDR-201ENST00000297423 TSNQ15631 228 aaKnown RBP14.65□□□□□ -0.06
SPIDR-201ENST00000297423 ZNF404Q494X3 552 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 ZNF678Q5SXM1 525 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 RBM23Q86U06 439 aaKnown RBP14.65□□□□□ -0.06
SPIDR-201ENST00000297423 STX19Q8N4C7 294 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 LEMD2Q8NC56 503 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 OR6Q1Q8NGQ2 317 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 HDAC2Q92769 488 aaKnown RBP14.65□□□□□ -0.06
SPIDR-201ENST00000297423 MAELQ96JY0 434 aaKnown RBP14.65□□□□□ -0.06
SPIDR-201ENST00000297423 Q96MT0 163 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 YTHDF1Q9BYJ9 559 aaKnown RBP14.65□□□□□ -0.06
SPIDR-201ENST00000297423 RNF167Q9H6Y7 350 aa14.65□□□□□ -0.06
SPIDR-201ENST00000297423 E5RI56 91 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 ATXN8OSP0DMR3 200 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 MYCLP1P12525 358 aaPredicted RBP14.64□□□□□ -0.07
SPIDR-201ENST00000297423 RPL38P63173 70 aaKnown RBP14.64□□□□□ -0.07
SPIDR-201ENST00000297423 MXD1Q05195 221 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 GRSF1Q12849 480 aaKnown RBP eCLIP14.64□□□□□ -0.07
SPIDR-201ENST00000297423 TBRG1Q3YBR2 411 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 GPR153Q6NV75 609 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.64□□□□□ -0.07
SPIDR-201ENST00000297423 RNF180Q86T96 592 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 SVOPQ8N4V2 548 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 EFHBQ8N7U6 833 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 PCSK9Q8NBP7 692 aaKnown RBP14.64□□□□□ -0.07
SPIDR-201ENST00000297423 NXF3Q9H4D5 531 aaKnown RBP14.64□□□□□ -0.07
SPIDR-201ENST00000297423 GSTO2Q9H4Y5 243 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 MYADML2A6NDP7 307 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 DFNA5O60443 496 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 CNPP09543 421 aaKnown RBP14.64□□□□□ -0.07
SPIDR-201ENST00000297423 AQP1P29972 269 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 THPOP40225 353 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 CASP3P42574 277 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 HNRNPFP52597 415 aaKnown RBP14.64□□□□□ -0.07
SPIDR-201ENST00000297423 CLCA4Q14CN2 919 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 SLC22A15Q8IZD6 547 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 PIK3C3Q8NEB9 887 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 HHIPL1Q96JK4 782 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 RBM4BQ9BQ04 359 aaKnown RBP14.64□□□□□ -0.07
SPIDR-201ENST00000297423 RBM4Q9BWF3 364 aaKnown RBP14.64□□□□□ -0.07
SPIDR-201ENST00000297423 SP110Q9HB58 689 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 MBLAC1A4D2B0 266 aaPredicted RBP14.64□□□□□ -0.07
SPIDR-201ENST00000297423 MOXD2PA6NHM9 499 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 GPR32O75388 356 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 NDUFS3O75489 264 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 INPP1P49441 399 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 CDKN2DP55273 166 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 MCCD1P59942 119 aaPredicted RBP14.64□□□□□ -0.07
SPIDR-201ENST00000297423 ZDHHC17Q8IUH5 632 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 TMEM151AQ8N4L1 468 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 CAMKK1Q8N5S9 505 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 B3GALT6Q96L58 329 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 VAT1Q99536 393 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 IGSF5Q9NSI5 407 aa14.64□□□□□ -0.07
SPIDR-201ENST00000297423 TBKBP1A7MCY6 615 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 SEMA3DO95025 777 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 LRATO95237 230 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 EIF2S1P05198 315 aaKnown RBP14.63□□□□□ -0.07
SPIDR-201ENST00000297423 PRSS56P0CW18 603 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 HSD17B1P14061 328 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 TGM1P22735 817 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 ADARB1P78563 741 aaKnown RBP14.63□□□□□ -0.07
SPIDR-201ENST00000297423 MRPS6P82932 125 aaKnown RBP14.63□□□□□ -0.07
SPIDR-201ENST00000297423 MED22Q15528 200 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 SYCE2Q6PIF2 218 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 MINDY1Q8N5J2 469 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 CYP2S1Q96SQ9 504 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 LRRC3Q9BY71 257 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 GLOD4Q9HC38 313 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 MAGEL2Q9UJ55 1249 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 TRPV2Q9Y5S1 764 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 SSX4O60224 188 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 UMPSP11172 480 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 CYBAP13498 195 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 RAB25P57735 213 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 GALNT2Q10471 571 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 CRY1Q16526 586 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 MAPKAPK3Q16644 382 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 DDR2Q16832 855 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 NECAB2Q7Z6G3 386 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 PROSER1Q86XN7 944 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 COLGALT2Q8IYK4 626 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 REM2Q8IYK8 340 aaPredicted RBP14.63□□□□□ -0.07
SPIDR-201ENST00000297423 FLCNQ8NFG4 579 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 TRIM54Q9BYV2 358 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 PCDH10Q9P2E7 1040 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 H0YAE9 185 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 AP3D1O14617 1153 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 GLP2RO95838 553 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 IL12RB1P42701 662 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 TOP3AQ13472 1001 aaPredicted RBP14.63□□□□□ -0.07
SPIDR-201ENST00000297423 ACAP2Q15057 778 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 WSCD1Q658N2 575 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 SCN4BQ8IWT1 228 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 TCAIMQ8N3R3 496 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 CD99L2Q8TCZ2 262 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 PTERQ96BW5 349 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 ULK4Q96C45 1275 aa14.63□□□□□ -0.07
SPIDR-201ENST00000297423 UHRF1Q96T88 793 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms