RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 FNDC8Q8TC99 324 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 RERGQ96A58 199 aaPredicted RBP13.25□□□□□ -0.29
HPS3-201ENST00000296051 PRICKLE1Q96MT3 831 aaPredicted RBP13.25□□□□□ -0.29
HPS3-201ENST00000296051 TOR3AQ9H497 397 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 ELOVL2Q9NXB9 296 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 ENTPD4Q9Y227 616 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 NWD2Q9ULI1 1742 aa13.25□□□□□ -0.29
HPS3-201ENST00000296051 LOC110117498-PIK3R3F6TDL0 507 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 SNNO75324 88 aaPredicted RBP13.24□□□□□ -0.29
HPS3-201ENST00000296051 TFAP2AP05549 437 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 CDK4P11802 303 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 TLX1P31314 330 aaPredicted RBP13.24□□□□□ -0.29
HPS3-201ENST00000296051 MC4RP32245 332 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 NDST2P52849 883 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 PTPRCAPQ14761 206 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 OGFRL1Q5TC84 451 aaPredicted RBP13.24□□□□□ -0.29
HPS3-201ENST00000296051 MUS81Q96NY9 551 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 KLHL28Q9NXS3 571 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 PDP1Q9P0J1 537 aaPredicted RBP13.24□□□□□ -0.29
HPS3-201ENST00000296051 RCOR3Q9P2K3 495 aaPredicted RBP13.24□□□□□ -0.29
HPS3-201ENST00000296051 GNPTGQ9UJJ9 305 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 SPATA2Q9UM82 520 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 A0A1W2PQ67 120 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 RFXANKO14593 260 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 NBNO60934 754 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 ERAL1O75616 437 aaKnown RBP13.24□□□□□ -0.29
HPS3-201ENST00000296051 EPN2O95208 641 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 DIO3P55073 304 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 ELP6Q0PNE2 266 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 NCF4Q15080 339 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 ZNF829Q3KNS6 432 aaPredicted RBP13.24□□□□□ -0.29
HPS3-201ENST00000296051 TIFABQ6ZNK6 161 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 PIK3C3Q8NEB9 887 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 GPR156Q8NFN8 814 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 SMURF2Q9HAU4 748 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 CD84Q9UIB8 345 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 RAI2Q9Y5P3 530 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 MYO10Q9HD67 2058 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 NPHS1O60500 1241 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 PCCBP05166 539 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 C1DQ13901 141 aaKnown RBP13.24□□□□□ -0.29
HPS3-201ENST00000296051 TMEM110Q86TL2 294 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 BEND7Q8N7W2 519 aaPredicted RBP13.24□□□□□ -0.29
HPS3-201ENST00000296051 FUBP3Q96I24 572 aaKnown RBP eCLIP13.24□□□□□ -0.29
HPS3-201ENST00000296051 MOCS1Q9NZB8 636 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 WNT6Q9Y6F9 365 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 PRORSD1PA6NEY8 169 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 DIRAS1O95057 198 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 PFKMP08237 780 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 POU2F1P14859 743 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 ALAS2P22557 587 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 HSPA7P48741 367 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 YBEYP58557 167 aaPredicted RBP13.24□□□□□ -0.29
HPS3-201ENST00000296051 RPS7P62081 194 aaKnown RBP13.24□□□□□ -0.29
HPS3-201ENST00000296051 ACAP2Q15057 778 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 PDGFRLQ15198 375 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 SF1Q15637 639 aaKnown RBP13.24□□□□□ -0.29
HPS3-201ENST00000296051 AAK1Q2M2I8 961 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 UGT2A3Q6UWM9 527 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 GPR180Q86V85 440 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 TRPV3Q8NET8 790 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 TMBIM1Q969X1 311 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 SIPA1Q96FS4 1042 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 VPS35Q96QK1 796 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 ABCB9Q9NP78 766 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 GALPQ9UBC7 116 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 ITGB1BP2Q9UKP3 347 aa13.24□□□□□ -0.29
HPS3-201ENST00000296051 OR10H2O60403 315 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 IMPDH2P12268 514 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 MYBPC1Q00872 1141 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 LCP2Q13094 533 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 MAD2L1Q13257 205 aaPredicted RBP13.23□□□□□ -0.29
HPS3-201ENST00000296051 RAB39AQ14964 217 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 PDCD4Q53EL6 469 aaKnown RBP13.23□□□□□ -0.29
HPS3-201ENST00000296051 COLEC12Q5KU26 742 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 ERMP1Q7Z2K6 904 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 TMCO2Q7Z6W1 182 aaPredicted RBP13.23□□□□□ -0.29
HPS3-201ENST00000296051 SLC39A8Q9C0K1 460 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 RPRD1BQ9NQG5 326 aaKnown RBP13.23□□□□□ -0.29
HPS3-201ENST00000296051 ADPRHL2Q9NX46 363 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 SUCOQ9UBS9 1254 aaKnown RBP13.23□□□□□ -0.29
HPS3-201ENST00000296051 OR2AG2A6NM03 316 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 SDHDO14521 159 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 RGS10O43665 173 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 FGF1P05230 155 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 RHOQP17081 205 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 IDSP22304 550 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 SRP54P61011 504 aaKnown RBP13.23□□□□□ -0.29
HPS3-201ENST00000296051 NUMA1Q14980 2115 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 TEAD4Q15561 434 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 FAM174BQ3ZCQ3 159 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 CMPK2Q5EBM0 449 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 AFTPHQ6ULP2 937 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 NCCRP1Q6ZVX7 275 aaPredicted RBP13.23□□□□□ -0.29
HPS3-201ENST00000296051 PROSER1Q86XN7 944 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 APOLD1Q96LR9 279 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 KCTD3Q9Y597 815 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 KCNE2Q9Y6J6 123 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 ELOVL7A1L3X0 281 aa13.23□□□□□ -0.29
HPS3-201ENST00000296051 FAM72CH0Y354 149 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms