RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CD1CP29017 333 aa26.28■■□□□ 1.8
SSU72-201ENST00000291386 PREPP48147 710 aa26.28■■□□□ 1.8
SSU72-201ENST00000291386 CARSP49589 748 aaKnown RBP26.28■■□□□ 1.8
SSU72-201ENST00000291386 MPP1Q00013 466 aa26.28■■□□□ 1.8
SSU72-201ENST00000291386 MGAT5Q09328 741 aa26.28■■□□□ 1.8
SSU72-201ENST00000291386 BOP1Q14137 746 aaKnown RBP26.28■■□□□ 1.8
SSU72-201ENST00000291386 SYTL3Q4VX76 610 aa26.28■■□□□ 1.8
SSU72-201ENST00000291386 RBM44Q6ZP01 1051 aaKnown RBP26.28■■□□□ 1.8
SSU72-201ENST00000291386 PDZD3Q86UT5 571 aa26.28■■□□□ 1.8
SSU72-201ENST00000291386 PALM2Q8IXS6 379 aa26.28■■□□□ 1.8
SSU72-201ENST00000291386 GRAMD1AQ96CP6 724 aa26.28■■□□□ 1.8
SSU72-201ENST00000291386 DEPDC7Q96QD5 511 aa26.28■■□□□ 1.8
SSU72-201ENST00000291386 IMP3Q9NV31 184 aaKnown RBP26.28■■□□□ 1.8
SSU72-201ENST00000291386 KNTC1P50748 2209 aa26.28■■□□□ 1.8
SSU72-201ENST00000291386 SLCO2B1O94956 709 aa26.27■■□□□ 1.8
SSU72-201ENST00000291386 APOA4P06727 396 aa26.27■■□□□ 1.8
SSU72-201ENST00000291386 JUPP14923 745 aa26.27■■□□□ 1.8
SSU72-201ENST00000291386 ACADLP28330 430 aa26.27■■□□□ 1.8
SSU72-201ENST00000291386 MAGEA4P43358 317 aa26.27■■□□□ 1.8
SSU72-201ENST00000291386 CLDN6P56747 220 aa26.27■■□□□ 1.8
SSU72-201ENST00000291386 PLEKHS1Q5SXH7 462 aa26.27■■□□□ 1.8
SSU72-201ENST00000291386 CCNI2Q6ZMN8 369 aaPredicted RBP26.27■■□□□ 1.8
SSU72-201ENST00000291386 CEP128Q6ZU80 1094 aa26.27■■□□□ 1.8
SSU72-201ENST00000291386 SLC22A15Q8IZD6 547 aa26.27■■□□□ 1.8
SSU72-201ENST00000291386 DPYSL5Q9BPU6 564 aa26.27■■□□□ 1.8
SSU72-201ENST00000291386 TSPYL1Q9H0U9 437 aa26.27■■□□□ 1.8
SSU72-201ENST00000291386 PPANQ9NQ55 473 aaKnown RBP26.27■■□□□ 1.8
SSU72-201ENST00000291386 MTRF1LQ9UGC7 380 aaKnown RBP26.27■■□□□ 1.8
SSU72-201ENST00000291386 KLK13Q9UKR3 277 aa26.27■■□□□ 1.8
SSU72-201ENST00000291386 MSRB2Q9Y3D2 182 aa26.27■■□□□ 1.8
SSU72-201ENST00000291386 COLEC10Q9Y6Z7 277 aa26.27■■□□□ 1.8
SSU72-201ENST00000291386 NCOR2Q9Y618 2525 aa26.27■■□□□ 1.8
SSU72-201ENST00000291386 D6RAR5 112 aa26.26■■□□□ 1.79
SSU72-201ENST00000291386 NIPSNAP2O75323 286 aa26.26■■□□□ 1.79
SSU72-201ENST00000291386 CPNE6O95741 557 aa26.26■■□□□ 1.79
SSU72-201ENST00000291386 GABRB3P28472 473 aa26.26■■□□□ 1.79
SSU72-201ENST00000291386 GPR18Q14330 331 aa26.26■■□□□ 1.79
SSU72-201ENST00000291386 TMED2Q15363 201 aa26.26■■□□□ 1.79
SSU72-201ENST00000291386 ZNF549Q6P9A3 640 aa26.26■■□□□ 1.79
SSU72-201ENST00000291386 NAPRTQ6XQN6 538 aa26.26■■□□□ 1.79
SSU72-201ENST00000291386 ZNF761Q86XN6 746 aaPredicted RBP26.26■■□□□ 1.79
SSU72-201ENST00000291386 RELL1Q8IUW5 271 aa26.26■■□□□ 1.79
SSU72-201ENST00000291386 OR10G6Q8NH81 332 aa26.26■■□□□ 1.79
SSU72-201ENST00000291386 KCNJ9Q92806 393 aa26.26■■□□□ 1.79
SSU72-201ENST00000291386 CCDC68Q9H2F9 335 aa26.26■■□□□ 1.79
SSU72-201ENST00000291386 KLHL42Q9P2K6 505 aa26.26■■□□□ 1.79
SSU72-201ENST00000291386 ANGPTL2Q9UKU9 493 aa26.26■■□□□ 1.79
SSU72-201ENST00000291386 CFAP20Q9Y6A4 193 aaKnown RBP26.26■■□□□ 1.79
SSU72-201ENST00000291386 PRAMEF33A0A0G2JMD5 474 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 AHSGP02765 367 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 ECHS1P30084 290 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 SSTR1P30872 391 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 HSPA14Q0VDF9 509 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 CUL1Q13616 776 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 GBX1Q14549 363 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 BRD3Q15059 726 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 ISXQ2M1V0 245 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 CNSTQ6PJW8 725 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 OTOAQ7RTW8 1153 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 CCDC25Q86WR0 208 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 LRRN4CLQ8ND94 238 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 TFGQ92734 400 aaPredicted RBP26.25■■□□□ 1.79
SSU72-201ENST00000291386 TBC1D10AQ9BXI6 508 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 KIR3DX1Q9H7L2 352 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 MVB12BQ9H7P6 319 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 ZFATQ9P243 1243 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 MED16Q9Y2X0 877 aa26.25■■□□□ 1.79
SSU72-201ENST00000291386 DUX1O43812 170 aa26.24■■□□□ 1.79
SSU72-201ENST00000291386 F7P08709 466 aaPredicted RBP26.24■■□□□ 1.79
SSU72-201ENST00000291386 CHRM3P20309 590 aa26.24■■□□□ 1.79
SSU72-201ENST00000291386 PDX1P52945 283 aa26.24■■□□□ 1.79
SSU72-201ENST00000291386 GPX6P59796 221 aa26.24■■□□□ 1.79
SSU72-201ENST00000291386 TARDBPQ13148 414 aaKnown RBP eCLIP26.24■■□□□ 1.795e-10■□□□□ 10.2
SSU72-201ENST00000291386 AMZ1Q400G9 498 aa26.24■■□□□ 1.79
SSU72-201ENST00000291386 C3orf62Q6ZUJ4 267 aa26.24■■□□□ 1.79
SSU72-201ENST00000291386 PIM3Q86V86 326 aa26.24■■□□□ 1.79
SSU72-201ENST00000291386 SLC26A11Q86WA9 606 aa26.24■■□□□ 1.79
SSU72-201ENST00000291386 IFT20Q8IY31 132 aa26.24■■□□□ 1.79
SSU72-201ENST00000291386 IFT81Q8WYA0 676 aa26.24■■□□□ 1.79
SSU72-201ENST00000291386 C9orf72Q96LT7 481 aa26.24■■□□□ 1.79
SSU72-201ENST00000291386 AARSD1Q9BTE6 412 aaKnown RBP26.24■■□□□ 1.79
SSU72-201ENST00000291386 SYNDIG1Q9H7V2 258 aa26.24■■□□□ 1.79
SSU72-201ENST00000291386 LRRC4CQ9HCJ2 640 aa26.24■■□□□ 1.79
SSU72-201ENST00000291386 NSMCE4AQ9NXX6 385 aa26.24■■□□□ 1.79
SSU72-201ENST00000291386 ATXN7L1Q9ULK2 861 aaPredicted RBP26.24■■□□□ 1.79
SSU72-201ENST00000291386 CORO1CQ9ULV4 474 aaPredicted RBP26.24■■□□□ 1.79
SSU72-201ENST00000291386 SPEGQ15772 3267 aa26.24■■□□□ 1.79
SSU72-201ENST00000291386 TMX2-CTNND1H3BSU7 103 aa26.23■■□□□ 1.79
SSU72-201ENST00000291386 CSO75390 466 aaKnown RBP26.23■■□□□ 1.79
SSU72-201ENST00000291386 SPAG6O75602 509 aa26.23■■□□□ 1.79
SSU72-201ENST00000291386 SPINK2P20155 84 aa26.23■■□□□ 1.79
SSU72-201ENST00000291386 ATP5DP30049 168 aa26.23■■□□□ 1.79
SSU72-201ENST00000291386 CLCN7P51798 805 aa26.23■■□□□ 1.79
SSU72-201ENST00000291386 CFHR1Q03591 330 aa26.23■■□□□ 1.79
SSU72-201ENST00000291386 ZFP36L1Q07352 338 aaKnown RBP26.23■■□□□ 1.79
SSU72-201ENST00000291386 CAMK2BQ13554 666 aa26.23■■□□□ 1.79
SSU72-201ENST00000291386 DUS1LQ6P1R4 473 aaKnown RBP26.23■■□□□ 1.79
SSU72-201ENST00000291386 WDR74Q6RFH5 385 aaPredicted RBP26.23■■□□□ 1.79
SSU72-201ENST00000291386 VRK3Q8IV63 474 aa26.23■■□□□ 1.79
SSU72-201ENST00000291386 AHCYL2Q96HN2 611 aaKnown RBP26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms