RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 TMEM240Q5SV17 173 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 TMPRSS11AQ6ZMR5 421 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 PRR23BQ6ZRT6 265 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 ASRGL1Q7L266 308 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 CDYL2Q8N8U2 506 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 ZNF671Q8TAW3 534 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 SLC47A1Q96FL8 570 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 HTR3EA5X5Y0 456 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 ZNF99A8MXY4 864 aaPredicted RBP11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 STX16-NPEPL1H3BU86 382 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 I3L521 148 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 CPNE3O75131 537 aaKnown RBP11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 STX11O75558 287 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 GJA1P17302 382 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 NOMO1Q15155 1222 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 POM121L1PQ3SYA9 428 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 IRAK1BP1Q5VVH5 260 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 CDC73Q6P1J9 531 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 GALNT12Q8IXK2 581 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 OR8H3Q8N146 312 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 C12orf76Q8N812 135 aaPredicted RBP11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 CANT1Q8WVQ1 401 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 ISOC1Q96CN7 298 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 TMCO6Q96DC7 493 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 MYO19Q96H55 970 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 RBM4BQ9BQ04 359 aaKnown RBP11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 RBM4Q9BWF3 364 aaKnown RBP11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 MIOSQ9NXC5 875 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 PFDN2Q9UHV9 154 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 SNX7Q9UNH6 387 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 MAPRE3Q9UPY8 281 aa11.22□□□□□ -0.61
NPC1L1-201ENST00000289547 H3BM21 787 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 KPNA5O15131 536 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 RGS14O43566 566 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 ALPPL2P10696 532 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 CYP2A7P20853 494 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 CDKN2BP42772 138 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 HADHBP55084 474 aaKnown RBP11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 TGM3Q08188 693 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 C11orf91Q3C1V1 193 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 UBXN11Q5T124 520 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 ZNF549Q6P9A3 640 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 JOSD2Q8TAC2 188 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 KBTBD7Q8WVZ9 684 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 TFAP2BQ92481 460 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 HAPLN3Q96S86 360 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 KXD1Q9BQD3 176 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 CCDC3Q9BQI4 270 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 RHOBTB2Q9BYZ6 727 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 C1orf21Q9H246 121 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 TTYH1Q9H313 450 aaPredicted RBP11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 RPS6KA6Q9UK32 745 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 YJEFN3A6XGL0 299 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 LEFTY2O00292 366 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 PAICSP22234 425 aaKnown RBP11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 PROZP22891 400 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 IGFBP5P24593 272 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 STAT5AP42229 794 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 POLD2P49005 469 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 STX4Q12846 297 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 RTP2Q5QGT7 225 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 TMEM198Q66K66 360 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 BHLHB9Q6PI77 547 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 TRAPPC5Q8IUR0 188 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 DEFB123Q8N688 67 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 STAG3L4Q8TBR4 150 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 AP3S1Q92572 193 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 NKIRAS2Q9NYR9 191 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 FBXO5Q9UKT4 447 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 UGT2B11O75310 529 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 SLC22A3O75751 556 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 LRIG2O94898 1065 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 CYP11A1P05108 521 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 YES1P07947 543 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 ITGB6P18564 788 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 AKT2P31751 481 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 GPC1P35052 558 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 GSTM5P46439 218 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 STARP49675 285 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 AP1S1P61966 158 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 CMPK2Q5EBM0 449 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 TREML1Q86YW5 311 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 CPSF7Q8N684 471 aaKnown RBP11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 NETO2Q8NC67 525 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 OR52K2Q8NGK3 314 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 NDRG1Q92597 394 aaKnown RBP11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 HDAC10Q969S8 669 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 ABCB8Q9NUT2 735 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 TBX21Q9UL17 535 aa11.21□□□□□ -0.61
NPC1L1-201ENST00000289547 AKAP11Q9UKA4 1901 aa11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 LAMTOR5O43504 91 aa11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 NCK1P16333 377 aa11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 AOC1P19801 751 aa11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 GRM2Q14416 872 aa11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 USP39Q53GS9 565 aaKnown RBP11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 INTS11Q5TA45 600 aaKnown RBP11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 CNSTQ6PJW8 725 aa11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 MON1BQ7L1V2 547 aa11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 GPSM1Q86YR5 675 aa11.21□□□□□ -0.62
NPC1L1-201ENST00000289547 NELL2Q99435 816 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms