RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 SMU1Q2TAY7 513 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 KLHL35Q6PF15 583 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 CYS1Q717R9 158 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 SLC30A2Q9BRI3 323 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 ERVK-6Q9BXR3 956 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 EMC3Q9P0I2 261 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 OR6C70A6NIJ9 312 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 ECHS1P30084 290 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 MYBPC1Q00872 1141 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 WSCD2Q2TBF2 565 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 ALFQ53S48 1182 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 RHBDF2Q6PJF5 856 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 KRT77Q7Z794 578 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 RALGPS2Q86X27 583 aaPredicted RBP17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 FCRL2Q96LA5 508 aaPredicted RBP17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 TTPALQ9BTX7 342 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 GTF2A1LQ9UNN4 478 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 ABCG2Q9UNQ0 655 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 HSPE1-MOB4S4R3N1 261 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 A0A0X1KG70 313 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 PLOD2O00469 737 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 MAGEB3O15480 346 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 PSIP1O75475 530 aaKnown RBP17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 CKMT2P17540 419 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 ATP6AP1Q15904 470 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 DPYSL2Q16555 572 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 IQCCQ4KMZ1 466 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 IFI44LQ53G44 452 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 ADNP2Q6IQ32 1131 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 UBE2Q1Q7Z7E8 422 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 FZD8Q9H461 694 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 POFUT2Q9Y2G5 429 aa17.27■□□□□ 0.36
PCDHA13-201ENST00000289272 MOXD2PA6NHM9 499 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 PIP5K1BO14986 540 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 BUD23O43709 281 aaKnown RBP17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 LDOC1O95751 146 aaPredicted RBP17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 GDF10P55107 478 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 SMCO1Q147U7 214 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 PPCDCQ96CD2 204 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 PRICKLE1Q96MT3 831 aaPredicted RBP17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 TMEM209Q96SK2 561 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 CNPPD1Q9BV87 410 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 MRPS23Q9Y3D9 190 aaKnown RBP17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 CNTNAP1P78357 1384 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 A0A0G2JPF8 293 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 LOC100130705A0A1B0GUX0 176 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 HNRNPCL3B7ZW38 293 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 FPGTO14772 594 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 INMTO95050 263 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 HNRNPCL4P0DMR1 293 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 HNRNPFP52597 415 aaKnown RBP17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 PTPN5P54829 565 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 BOP1Q14137 746 aaKnown RBP17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 RAB39AQ14964 217 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 ZNF567Q8N184 647 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 ZNF490Q9ULM2 529 aaPredicted RBP17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 U3KQV3 271 aa17.27■□□□□ 0.35
PCDHA13-201ENST00000289272 FAM47E-STBD1D6RA91 191 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 J3QRK9 145 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 GABBR2O75899 941 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 PTTG1O95997 202 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 TSPAN8P19075 237 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 MAGP20916 626 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 LINC00471Q8N535 108 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 FBXL8Q96CD0 374 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 SLC25A51Q9H1U9 297 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 ARHGEF4Q9NR80 690 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 NFKBIL1Q9UBC1 381 aaPredicted RBP17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 PCDHGB3Q9Y5G1 929 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 AKAP8O43823 692 aaKnown RBP17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 SLITRK5O94991 958 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 SERPINA3P01011 423 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 HPGDP15428 266 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 SLC9A3P48764 834 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 CBLBQ13191 982 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 CTC1Q2NKJ3 1217 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 PARP15Q460N3 678 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 FAM20CQ8IXL6 584 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 CLP1Q92989 425 aaKnown RBP17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 KCTD7Q96MP8 289 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 ASB8Q9H765 288 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 GOLGA2P5Q9HBQ8 144 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 LYVE1Q9Y5Y7 322 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 DLGAP1O14490 977 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 NR2F1P10589 423 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 SLC2A2P11168 524 aaPredicted RBP17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 DCST1Q5T197 706 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 FAM46CQ5VWP2 391 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 CLHC1Q8NHS4 586 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 DMRTB1Q96MA1 342 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 MCCC1Q96RQ3 725 aaPredicted RBP17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 E7ESA3 106 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 FFAR3O14843 346 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 GPR42O15529 346 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 TSTD2Q5T7W7 516 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 SLC51AQ86UW1 340 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 PARP8Q8N3A8 854 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 CHCHD4Q8N4Q1 142 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 TMBIM1Q969X1 311 aa17.26■□□□□ 0.35
PCDHA13-201ENST00000289272 CCDC32Q9BV29 185 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms