RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 BANPQ8N9N5 519 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 NECAB3Q96P71 396 aaPredicted RBP8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 SYTL2Q9HCH5 934 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 C2orf42Q9NWW7 574 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 C17orf113A0A1B0GUU1 675 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 TNFRSF10CO14798 259 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 LAMTOR5O43504 91 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 SUPT3HO75486 399 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 CD27P26842 260 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 MAT2AP31153 395 aaKnown RBP8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 ACSL1P33121 698 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 INPP1P49441 399 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 CLCNKAP51800 687 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 PFN3P60673 137 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 OVGP1Q12889 678 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 C1orf210Q8IVY1 113 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 RDH11Q8TC12 318 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 INPP5DQ92835 1189 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 SCAMP4Q969E2 229 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 FAM96AQ9H5X1 160 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 RERGLQ9H628 205 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 BCAP29Q9UHQ4 241 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 POLEQ07864 2286 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 MYO10Q9HD67 2058 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 A0A0U1RQS6 177 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 METTL12A8MUP2 240 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 C5orf58C9J3I9 102 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 CACNB4O00305 520 aaPredicted RBP8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 PCCBP05166 539 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 CDKN1CP49918 316 aaPredicted RBP8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 CLCN7P51798 805 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 TIAL1Q01085 375 aaKnown RBP eCLIP8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 EIF2B5Q13144 721 aaKnown RBP8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 LPAL2Q16609 132 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 RFLNAQ6ZTI6 216 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 FBXL6Q8N531 539 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 NKAPQ8N5F7 415 aaKnown RBP8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 SERAC1Q96JX3 654 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 SPATS2LQ9NUQ6 558 aaKnown RBP8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 MARCOQ9UEW3 520 aaPredicted RBP8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 L3MBTL1Q9Y468 752 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 ORC6Q9Y5N6 252 aa8.29□□□□□ -1.08
PTPDC1-201ENST00000288976 XIRP2A4UGR9 3374 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 CUL9Q8IWT3 2517 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 A0A1W2PPC4 97 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 TYROBPO43914 113 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 MPC1LP0DKB6 136 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 ALDH18A1P54886 795 aaKnown RBP8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 DMPKQ09013 629 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 NFATC4Q14934 902 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 CCDC153Q494R4 210 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 PEAR1Q5VY43 1037 aaPredicted RBP8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 KDM7AQ6ZMT4 941 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 GCNT7Q6ZNI0 430 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 EXOC3L1Q86VI1 746 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 GAB3Q8WWW8 586 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 ARL8AQ96BM9 186 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 TIMM29Q9BSF4 260 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 APOOQ9BUR5 198 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 DERL2Q9GZP9 239 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 WWOXQ9NZC7 414 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 SLC31A1O15431 190 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 LILRB5O75023 590 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 ENO3P13929 434 aaPredicted RBP8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 GRK3P35626 688 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 RASSF2P50749 326 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 ATP6V0D1P61421 351 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 SEMG2Q02383 582 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 RPA4Q13156 261 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 SP140Q13342 867 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 TTLL9Q3SXZ7 439 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 WDR45BQ5MNZ6 344 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 MROH9Q5TGP6 573 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 SLC41A1Q8IVJ1 513 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 UBXN10Q96LJ8 280 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 ORAI3Q9BRQ5 295 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 CCM2Q9BSQ5 444 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 C1QTNF1Q9BXJ1 281 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 C6orf106Q9H6K1 298 aaPredicted RBP8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 MBNL1Q9NR56 388 aaKnown RBP8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 DHRS7Q9Y394 339 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 KDM1AO60341 852 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 KLHL2O95198 593 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 SLC25A14O95258 325 aaPredicted RBP8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 PRSS56P0CW18 603 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 OAS2P29728 719 aaKnown RBP8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 FMO4P31512 558 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 ALDH9A1P49189 494 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 CDKN2DP55273 166 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 HPCAP84074 193 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 TMEM115Q12893 351 aaPredicted RBP8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 ZNF789Q5FWF6 425 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 ATG16L1Q676U5 607 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 PRSS58Q8IYP2 241 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 MAML2Q8IZL2 1156 aaPredicted RBP8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 ZBTB2Q8N680 514 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 PLA2G15Q8NCC3 412 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 OLFM1Q99784 485 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 HAUS8Q9BT25 410 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms