RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 CCDC188H7C350 402 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 CD3EAPO15446 510 aaKnown RBP8.95□□□□□ -0.98
HMGN1-201ENST00000288344 BRINP1O60477 761 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 SNX2O60749 519 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 ALDH4A1P30038 563 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 CD151P48509 253 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 VPS41P49754 854 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 ERVPABLB-1P60509 514 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 TIAL1Q01085 375 aaKnown RBP eCLIP8.95□□□□□ -0.98
HMGN1-201ENST00000288344 DHX9Q08211 1270 aaKnown RBP8.95□□□□□ -0.98
HMGN1-201ENST00000288344 RPA4Q13156 261 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 SPIDRQ14159 915 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 INSCQ1MX18 579 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 PLA2G4EQ3MJ16 856 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 ZRANB3Q5FWF4 1079 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 ZNF789Q5FWF6 425 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 LYPLAL1Q5VWZ2 237 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 KIAA0930Q6ICG6 404 aaPredicted RBP8.95□□□□□ -0.98
HMGN1-201ENST00000288344 HIBCHQ6NVY1 386 aaPredicted RBP8.95□□□□□ -0.98
HMGN1-201ENST00000288344 AFTPHQ6ULP2 937 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 SYDE1Q6ZW31 735 aaPredicted RBP8.95□□□□□ -0.98
HMGN1-201ENST00000288344 LDB1Q86U70 411 aaPredicted RBP8.95□□□□□ -0.98
HMGN1-201ENST00000288344 SLC9B2Q86UD5 537 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 PIM3Q86V86 326 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 HOOK3Q86VS8 718 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 RBM12BQ8IXT5 1001 aaKnown RBP8.95□□□□□ -0.98
HMGN1-201ENST00000288344 PPIL6Q8IXY8 311 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 CFAP206Q8IYR0 622 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 SNIP1Q8TAD8 396 aaKnown RBP8.95□□□□□ -0.98
HMGN1-201ENST00000288344 GDAP1Q8TB36 358 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 HM13Q8TCT9 377 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 LKAAEAR1Q8TD35 194 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 GRK7Q8WTQ7 553 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 SH3KBP1Q96B97 665 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 TTC25Q96NG3 672 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 NRTNQ99748 197 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 MENTQ9BUN1 341 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 CARD6Q9BX69 1037 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 FOXP3Q9BZS1 431 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 B3GNT4Q9C0J1 378 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 CCDC86Q9H6F5 360 aaKnown RBP8.95□□□□□ -0.98
HMGN1-201ENST00000288344 COG4Q9H9E3 785 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 XAB2Q9HCS7 855 aaKnown RBP8.95□□□□□ -0.98
HMGN1-201ENST00000288344 CRLS1Q9UJA2 301 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 SATB2Q9UPW6 733 aa8.95□□□□□ -0.98
HMGN1-201ENST00000288344 MN1Q10571 1320 aaPredicted RBP8.94□□□□□ -0.98
HMGN1-201ENST00000288344 CACNA1GO43497 2377 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 KALRNO60229 2985 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 CCDC187A0A096LP49 1063 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 E7ESA3 106 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 TMX2-CTNND1H3BSU7 103 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 TTI1O43156 1089 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 SLCO2B1O94956 709 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 VAPBO95292 243 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 C1QAP02745 245 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 MPOP05164 745 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 FGF3P11487 239 aaPredicted RBP8.94□□□□□ -0.98
HMGN1-201ENST00000288344 MTHFD1P11586 935 aaKnown RBP8.94□□□□□ -0.98
HMGN1-201ENST00000288344 SLC2A4P14672 509 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 RPS3P23396 243 aaKnown RBP eCLIP8.94□□□□□ -0.98
HMGN1-201ENST00000288344 AOAHP28039 575 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 GABRB3P28472 473 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 CCR7P32248 378 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 EIF2S3P41091 472 aaKnown RBP8.94□□□□□ -0.98
HMGN1-201ENST00000288344 ETV5P41161 510 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 LMAN1P49257 510 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 INHBCP55103 352 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 EIF3IQ13347 325 aaKnown RBP8.94□□□□□ -0.98
HMGN1-201ENST00000288344 TRA2AQ13595 282 aaKnown RBP eCLIP8.94□□□□□ -0.988e-24■■□□□ 11.7
HMGN1-201ENST00000288344 GTF2H3Q13889 308 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 SEPT6Q14141 434 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 GPR18Q14330 331 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 GRB7Q14451 532 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 TBC1D25Q3MII6 688 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 CTSL3PQ5NE16 218 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 ZNF549Q6P9A3 640 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 SYT10Q6XYQ8 523 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 TAS2R42Q7RTR8 314 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 DTX1Q86Y01 620 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 JAMLQ86YT9 394 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 CILP2Q8IUL8 1156 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 VRK3Q8IV63 474 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 PPHLN1Q8NEY8 458 aaKnown RBP8.94□□□□□ -0.98
HMGN1-201ENST00000288344 WDR36Q8NI36 951 aaKnown RBP8.94□□□□□ -0.98
HMGN1-201ENST00000288344 SEC14L1Q92503 715 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 LPGAT1Q92604 370 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 TMEM159Q96B96 161 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 CAPZA3Q96KX2 299 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 PWWP2AQ96N64 755 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 TMEM74Q96NL1 305 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 TCF12Q99081 682 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 DPYSL5Q9BPU6 564 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 WWP1Q9H0M0 922 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 EPB41L1Q9H4G0 881 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 EPB41L5Q9HCM4 733 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 SIDT1Q9NXL6 827 aaKnown RBP8.94□□□□□ -0.98
HMGN1-201ENST00000288344 KCNK4Q9NYG8 393 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 PCDHGA7Q9Y5G6 932 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 PCDHGA3Q9Y5H0 932 aa8.94□□□□□ -0.98
HMGN1-201ENST00000288344 TEX264Q9Y6I9 313 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms