RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 MAD2L1BPQ15013 274 aaPredicted RBP9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 PAFAH1B3Q15102 231 aaKnown RBP9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 KYAT1Q16773 422 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 BTBD16Q32M84 506 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 GARNL3Q5VVW2 1013 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 LCLAT1Q6UWP7 414 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 MFSD6LQ8IWD5 586 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 YIPF7Q8N8F6 280 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 KHSRPQ92945 711 aaKnown RBP eCLIP9.69□□□□□ -0.861e-6■■■■□ 20.6
HMBOX1-201ENST00000287701 GPR137Q96N19 417 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 ACOX2Q99424 681 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 LPIN3Q9BQK8 851 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 RNF121Q9H920 327 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 PLCXD1Q9NUJ7 323 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 AIG1Q9NVV5 245 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 DPP3Q9NY33 737 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 ZIM2Q9NZV7 527 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 TRHDEQ9UKU6 1024 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 NDRG4Q9ULP0 352 aaKnown RBP9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 DNAJC15Q9Y5T4 150 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 K7ERI5 159 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 FAM20BO75063 409 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 PAPSS2O95340 614 aaPredicted RBP9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 LCKP06239 509 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 HOXD4P09016 255 aaPredicted RBP9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 LTA4HP09960 611 aaKnown RBP9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 GTF2A2P52657 109 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 SCN1BQ07699 218 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 GALEQ14376 348 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 PAGE3Q5JUK9 113 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 KDM4DQ6B0I6 523 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 LAIR1Q6GTX8 287 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 SHQ1Q6PI26 577 aaKnown RBP9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 ARSKQ6UWY0 536 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 GPAT4Q86UL3 456 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 OR8J3Q8NGG0 315 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 ASB15Q8WXK1 588 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 PDXPQ96GD0 296 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 RPL10LQ96L21 214 aaKnown RBP9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 DIMT1Q9UNQ2 313 aaKnown RBP9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 MFHAS1Q9Y4C4 1052 aa9.69□□□□□ -0.86
HMBOX1-201ENST00000287701 B4DXG7 233 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 ARNTLO00327 626 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 POLRMTO00411 1230 aaKnown RBP9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 STX16O14662 325 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 ANKRD28O15084 1053 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 PSMD3O43242 534 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 USP2O75604 605 aaPredicted RBP9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 PDE9AO76083 593 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 C1RP00736 705 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 ITGB3P05106 788 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 ATF6P18850 670 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 KCNA5P22460 613 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 SOX9P48436 509 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 SNX16P57768 344 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 OLR1P78380 273 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 ELP6Q0PNE2 266 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 RPS6KA2Q15349 733 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 SMAD1Q15797 465 aaKnown RBP9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 CLEC6AQ6EIG7 209 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 C19orf48Q6RUI8 117 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 SPESP1Q6UW49 350 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 DPP9Q86TI2 863 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 RNF130Q86XS8 419 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 ADGRG3Q86Y34 549 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 SLC47A1Q96FL8 570 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 ZC3HAV1LQ96H79 300 aaKnown RBP9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 HYLS1Q96M11 299 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 OPALINQ96PE5 141 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 TRNT1Q96Q11 434 aaKnown RBP9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 DCLRE1CQ96SD1 692 aaKnown RBP9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 PITX2Q99697 317 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 ELOVL4Q9GZR5 314 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 TMEM168Q9H0V1 697 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 SPNS1Q9H2V7 528 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 UCKL1Q9NWZ5 548 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 FBXO10Q9UK96 956 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 AGO1Q9UL18 857 aaKnown RBP9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 KLHL20Q9Y2M5 609 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 PCDHB5Q9Y5E4 795 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 V9GYH0 126 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 COL2A1P02458 1487 aaPredicted RBP9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 ARPC4-TTLL3A0A0A6YYG9 625 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 FAM234BA2RU67 622 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 NEMP2A6NFY4 417 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 MFSD11O43934 449 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 ATP6AP2O75787 350 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 NMBRP28336 390 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 ARL4AP40617 200 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 ZNF33BQ06732 778 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 IER5Q5VY09 327 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 APOBEC3HQ6NTF7 200 aaKnown RBP9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 BRAT1Q6PJG6 821 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 PLEKHM3Q6ZWE6 761 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 OR8H2Q8N162 312 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 DNAAF3Q8N9W5 541 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 C2CD4AQ8NCU7 369 aaPredicted RBP9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 OR8K5Q8NH50 307 aa9.68□□□□□ -0.86
HMBOX1-201ENST00000287701 IL31RAQ8NI17 732 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms