RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 OAS3Q9Y6K5 1087 aaKnown RBP13.2□□□□□ -0.3
SCAF4-201ENST00000286835 MITFO75030 526 aaPredicted RBP13.2□□□□□ -0.3
SCAF4-201ENST00000286835 PGLSO95336 258 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 ABCB1P08183 1280 aaPredicted RBP13.2□□□□□ -0.3
SCAF4-201ENST00000286835 DNAJB1P25685 340 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 ATP4BP51164 291 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 ZCCHC8Q6NZY4 707 aaKnown RBP13.2□□□□□ -0.3
SCAF4-201ENST00000286835 ZNF549Q6P9A3 640 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 SLC13A3Q8WWT9 602 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 STON2Q8WXE9 905 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 MS4A4AQ96JQ5 239 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 UBXN10Q96LJ8 280 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 NSMCE3Q96MG7 304 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 SH3GL1Q99961 368 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 OPTCQ9UBM4 332 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 WDR37Q9Y2I8 494 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 SAMHD1Q9Y3Z3 626 aaKnown RBP13.2□□□□□ -0.3
SCAF4-201ENST00000286835 SDK1Q7Z5N4 2213 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 COL4A5P29400 1685 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 DNAJC25-GNG10A0A024R161 153 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 FXYD1O00168 92 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 PSMD11O00231 422 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 RAD51BO15315 384 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 GPR39O43194 453 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 CKMP06732 381 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 COLEC12Q5KU26 742 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 SPANXN4Q5MJ08 99 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 FBXL22Q6P050 247 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 ZNF467Q7Z7K2 595 aaPredicted RBP13.19□□□□□ -0.3
SCAF4-201ENST00000286835 ZFP90Q8TF47 636 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 IMP4Q96G21 291 aaKnown RBP13.19□□□□□ -0.3
SCAF4-201ENST00000286835 TM6SF2Q9BZW4 377 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 C8orf4Q9NR00 106 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 AIG1Q9NVV5 245 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 FAM118AQ9NWS6 357 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 DNAJB9Q9UBS3 223 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 CRLS1Q9UJA2 301 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 TTC3P53804 2025 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 A0A1W2PQ67 120 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 F8W810 466 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 GABRDO14764 452 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 RGS14O43566 566 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 TULP3O75386 442 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 NCS1P62166 190 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 EPS8Q12929 822 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 GTDC1Q4AE62 458 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 BTLAQ7Z6A9 289 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 LRRTM3Q86VH5 581 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 SPARTQ8N0X7 666 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 LIX1Q8N485 282 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 SETD9Q8NE22 299 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 SPPL2AQ8TCT8 520 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 BRSK1Q8TDC3 778 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 REXO5Q96IC2 774 aaKnown RBP13.19□□□□□ -0.3
SCAF4-201ENST00000286835 ELOVL6Q9H5J4 265 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 ERVK-18Q9QC07 812 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 UBA2Q9UBT2 640 aaPredicted RBP13.19□□□□□ -0.3
SCAF4-201ENST00000286835 SLC45A1Q9Y2W3 748 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 HPCAL1P37235 193 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 PGFP49763 221 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 SEMG2Q02383 582 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 LTBP1Q14766 1721 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 L3HYPDHQ96EM0 354 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 ZNF419Q96HQ0 510 aaPredicted RBP13.19□□□□□ -0.3
SCAF4-201ENST00000286835 APOL4Q9BPW4 351 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 MUC13Q9H3R2 512 aa13.19□□□□□ -0.3
SCAF4-201ENST00000286835 PDP1Q9P0J1 537 aaPredicted RBP13.19□□□□□ -0.3
SCAF4-201ENST00000286835 URODP06132 367 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 RHOQP17081 205 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 HOXB8P17481 243 aaPredicted RBP13.18□□□□□ -0.3
SCAF4-201ENST00000286835 CST9Q5W186 159 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 GDF6Q6KF10 455 aaPredicted RBP13.18□□□□□ -0.3
SCAF4-201ENST00000286835 AFTPHQ6ULP2 937 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 FAM151BQ6UXP7 276 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 TMC5Q6UXY8 1006 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 ALDH16A1Q8IZ83 802 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 FAM86B1Q8N7N1 296 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 PDPRQ8NCN5 879 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 S100ZQ8WXG8 99 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 KIAA1191Q96A73 305 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 ZFYVE19Q96K21 471 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 SRRDQ9UH36 339 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 ZNF490Q9ULM2 529 aaPredicted RBP13.18□□□□□ -0.3
SCAF4-201ENST00000286835 PCDHB9Q9Y5E1 797 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 PCDHGA11Q9Y5H2 935 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 GPR45Q9Y5Y3 372 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 HOXA2O43364 376 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 F2P00734 622 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 ENO2P09104 434 aaPredicted RBP13.18□□□□□ -0.3
SCAF4-201ENST00000286835 PBX3P40426 434 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 STC1P52823 247 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 ACLYP53396 1101 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 USP41Q3LFD5 358 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 UGT3A2Q3SY77 523 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 RBM48Q5RL73 367 aaKnown RBP13.18□□□□□ -0.3
SCAF4-201ENST00000286835 DBF4BQ8NFT6 615 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 OR4F6Q8NGB9 312 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 SELENOMQ8WWX9 145 aa13.18□□□□□ -0.3
SCAF4-201ENST00000286835 RSPH1Q8WYR4 309 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms