RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 SNAP47Q5SQN1 464 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 PTCRAQ6ISU1 281 aaPredicted RBP8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 DUS1LQ6P1R4 473 aaKnown RBP8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 BRAT1Q6PJG6 821 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 ERN2Q76MJ5 926 aaKnown RBP8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 NXPE1Q8N323 547 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 CPXM2Q8N436 756 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 PTERQ96BW5 349 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 MTERF1Q99551 399 aaKnown RBP8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 AARSD1Q9BTE6 412 aaKnown RBP8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 GPR174Q9BXC1 333 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 XKR8Q9H6D3 395 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 CARS2Q9HA77 564 aaKnown RBP8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 CD93Q9NPY3 652 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 HPS4Q9NQG7 708 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 NDUFAF1Q9Y375 327 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 SIP14410 1827 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 PDCD11Q14690 1871 aaKnown RBP8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 A0A087X1B8 175 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 CAPN8A6NHC0 703 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 MRASO14807 208 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 EPOP01588 193 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 ADRB3P13945 408 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 GRIA2P42262 883 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 PRKAA2P54646 552 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 HMGCS1Q01581 520 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 IRF8Q02556 426 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 TMEM115Q12893 351 aaPredicted RBP8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 HNRNPA1L2Q32P51 320 aaKnown RBP8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 SLC9B1Q4ZJI4 515 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 IYDQ6PHW0 289 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 PHYKPLQ8IUZ5 450 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 PLD3Q8IV08 490 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 PTCD2Q8WV60 388 aaKnown RBP8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 PYDC1Q8WXC3 89 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 OTUB2Q96DC9 234 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 ZNF317Q96PQ6 595 aaPredicted RBP8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 SEPHS2Q99611 448 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 GDF15Q99988 308 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 TRIM8Q9BZR9 551 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 TREX1Q9NSU2 369 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 PPM1HQ9ULR3 514 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 HDAC3O15379 428 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 CTSEP14091 401 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 TIMP2P16035 220 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 HOXB8P17481 243 aaPredicted RBP8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 NSG1P42857 185 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 PTGER3P43115 390 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 MAGEA3P43357 314 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 KCNC1P48547 511 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 SPINT3P49223 89 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 MRPS35P82673 323 aaKnown RBP8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 KRT72Q14CN4 511 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 OR4D1Q15615 310 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 SPRED3Q2MJR0 410 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 ZNF549Q6P9A3 640 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 RELL1Q8IUW5 271 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 NKAPQ8N5F7 415 aaKnown RBP8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 AGAP11Q8TF27 550 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 OR52B2Q96RD2 323 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 IPPKQ9H8X2 491 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 TM7SF3Q9NS93 570 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 SIRPGQ9P1W8 387 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 CROTQ9UKG9 612 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 CLCA2Q9UQC9 943 aa8.88□□□□□ -0.99
CCDC144B-201ENST00000285176 NDUFS2O75306 463 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 FKBP6O75344 327 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 SEC22BO75396 215 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 TCEA3O75764 348 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 KRT6AP02538 564 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 KRT6BP04259 564 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 VCLP18206 1134 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 VIPR1P32241 457 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 KRT6CP48668 564 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 PRIM2P49643 509 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 CLCNKAP51800 687 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 PTSQ03393 145 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 TMED1Q13445 227 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 NFE2L1Q14494 772 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 PPP1R3AQ16821 1122 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 WASHC2DQ5SRD0 308 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 TMPRSS11BQ86T26 416 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 METTL3Q86U44 580 aaKnown RBP8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 OR56A4Q8NGH8 313 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 OR9I1Q8NGQ6 314 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 LZICQ8WZA0 190 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 FAM3CQ92520 227 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 INPP5DQ92835 1189 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 TSACCQ96A04 125 aaPredicted RBP8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 EID2BQ96D98 161 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 MAGED4Q96JG8 741 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 TMEM245Q9H330 911 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 SERGEFQ9UGK8 458 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 SLC22A14Q9Y267 594 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 PSMD12O00232 456 aaPredicted RBP8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 SDC3O75056 442 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 POP7O75817 140 aaKnown RBP8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 CPSF4O95639 269 aaKnown RBP8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 ANXA5P08758 320 aa8.87□□□□□ -0.99
CCDC144B-201ENST00000285176 HGFP14210 728 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms