RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 RPS3P23396 243 aaKnown RBP eCLIP6.38□□□□□ -1.39
CD44-204ENST00000279452 NDUFS1P28331 727 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 CD1CP29017 333 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 RBMS1P29558 406 aaKnown RBP6.38□□□□□ -1.39
CD44-204ENST00000279452 PDHA2P29803 388 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 CCR7P32248 378 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 CSF2RBP32927 897 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 CSTF2P33240 577 aaKnown RBP eCLIP6.38□□□□□ -1.39
CD44-204ENST00000279452 ABCG1P45844 678 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 ARCN1P48444 511 aaKnown RBP6.38□□□□□ -1.39
CD44-204ENST00000279452 ARL4DP49703 201 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 MAPK10P53779 464 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 EPHA4P54764 986 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 UBE2IP63279 158 aaKnown RBP6.38□□□□□ -1.39
CD44-204ENST00000279452 CAV1Q03135 178 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 ABRQ12979 859 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 PRKAA1Q13131 559 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 RPA4Q13156 261 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 PRKG2Q13237 762 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 FASTKD3Q14CZ7 662 aaKnown RBP6.38□□□□□ -1.39
CD44-204ENST00000279452 TYSND1Q2T9J0 566 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 TTLL9Q3SXZ7 439 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 ZNF789Q5FWF6 425 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 CTSL3PQ5NE16 218 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 CDCP2Q5VXM1 449 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 DUPD1Q68J44 220 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 TTC23LQ6PF05 361 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 KLHL35Q6PF15 583 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 CNSTQ6PJW8 725 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 WASH2PQ6VEQ5 465 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 FAM92BQ6ZTR7 304 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 RAB11FIP2Q7L804 512 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 ZNF572Q7Z3I7 529 aaPredicted RBP6.38□□□□□ -1.39
CD44-204ENST00000279452 TMEM135Q86UB9 458 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 PDZD3Q86UT5 571 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 OOSP2Q86WS3 158 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 IGDCC3Q8IVU1 814 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 LMNTD2Q8IXW0 634 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 ZBTB2Q8N680 514 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 GPATCH11Q8N954 259 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 NOA1Q8NC60 698 aaKnown RBP6.38□□□□□ -1.39
CD44-204ENST00000279452 PHC3Q8NDX5 983 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 MDM1Q8TC05 714 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 FBXO25Q8TCJ0 367 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 ASZ1Q8WWH4 475 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 LCN9Q8WX39 176 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 ZCCHC14Q8WYQ9 949 aaKnown RBP6.38□□□□□ -1.39
CD44-204ENST00000279452 LPGAT1Q92604 370 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 RSC1A1Q92681 617 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 TFGQ92734 400 aaPredicted RBP6.38□□□□□ -1.39
CD44-204ENST00000279452 CDKL2Q92772 493 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 LRRC39Q96DD0 335 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 MS4A3Q96HJ5 214 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 TCF12Q99081 682 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 NDNQ99608 321 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 CMKLR1Q99788 373 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 OR52A5Q9H2C5 316 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 TRIT1Q9H3H1 467 aaKnown RBP6.38□□□□□ -1.39
CD44-204ENST00000279452 SEMA6CQ9H3T2 930 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 SRMSQ9H3Y6 488 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 CCDC86Q9H6F5 360 aaKnown RBP6.38□□□□□ -1.39
CD44-204ENST00000279452 SLC40A1Q9NP59 571 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 WASH6PQ9NQA3 447 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 GRHL1Q9NZI5 618 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 TMEM9Q9P0T7 183 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 ZFATQ9P243 1243 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 SLC17A6Q9P2U8 582 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 PISDQ9UG56 409 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 MTRF1LQ9UGC7 380 aaKnown RBP6.38□□□□□ -1.39
CD44-204ENST00000279452 CIDEBQ9UHD4 219 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 FBXO5Q9UKT4 447 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 LOXL2Q9Y4K0 774 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 ENTPD2Q9Y5L3 495 aa6.38□□□□□ -1.39
CD44-204ENST00000279452 PTPRZ1P23471 2315 aaPredicted RBP6.38□□□□□ -1.39
CD44-204ENST00000279452 PIEZO1Q92508 2521 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 RIF1Q5UIP0 2472 aaKnown RBP6.37□□□□□ -1.39
CD44-204ENST00000279452 CACNA1EQ15878 2313 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 IGHV5-10-1A0A0J9YXX1 117 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 OR6C74A6NCV1 312 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 PABPN1LA6NDY0 278 aaKnown RBP6.37□□□□□ -1.39
CD44-204ENST00000279452 PRR19A6NJB7 356 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 TMX2-CTNND1H3BSU7 103 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 PLD2O14939 933 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 CAPN5O15484 640 aaPredicted RBP6.37□□□□□ -1.39
CD44-204ENST00000279452 KDM1AO60341 852 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 HAUS5O94927 633 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 TNFSF15O95150 251 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 S1PR4O95977 384 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 RPN2P04844 631 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 RHOXF2BP0C7M4 288 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 HOXB3P14651 431 aaPredicted RBP6.37□□□□□ -1.39
CD44-204ENST00000279452 ITIH1P19827 911 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 BDKRB1P46663 353 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 CAPZBP47756 277 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 LEPRP48357 1165 aaKnown RBP6.37□□□□□ -1.39
CD44-204ENST00000279452 CD151P48509 253 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 SEPHS1P49903 392 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 PDX1P52945 283 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 GFERP55789 205 aa6.37□□□□□ -1.39
CD44-204ENST00000279452 PLOD1Q02809 727 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms