RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 JADE3Q92613 823 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 RHBDF1Q96CC6 855 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 PDLIM5Q96HC4 596 aaKnown RBP17.61■□□□□ 0.41
CAPN1-201ENST00000279247 SPAG4Q9NPE6 437 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 NDUFAF1Q9Y375 327 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 RWDD3Q9Y3V2 267 aa17.61■□□□□ 0.41
CAPN1-201ENST00000279247 TCF20Q9UGU0 1960 aaKnown RBP17.6■□□□□ 0.41
CAPN1-201ENST00000279247 LOC730098B7Z3J9 87 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 MSH3P20585 1137 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 HOXA9P31269 272 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 PREPP48147 710 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 TSTA3Q13630 321 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-201ENST00000279247 GRM2Q14416 872 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 C6orf136Q5SQH8 315 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 KBTBD6Q86V97 674 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 BPIFB1Q8TDL5 484 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 ZNF184Q99676 751 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-201ENST00000279247 ZDHHC7Q9NXF8 308 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 SLAMF8Q9P0V8 285 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 MAP10Q9P2G4 905 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 POLR3HQ9Y535 204 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-201ENST00000279247 TNPO3Q9Y5L0 923 aaKnown RBP17.6■□□□□ 0.41
CAPN1-201ENST00000279247 COL6A3P12111 3177 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 ADH1CP00326 375 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 CYP2A6P11509 494 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-201ENST00000279247 LEMD2Q8NC56 503 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 OSCP1Q8WVF1 389 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 PTBP2Q9UKA9 531 aaKnown RBP17.6■□□□□ 0.41
CAPN1-201ENST00000279247 PDE10AQ9Y233 779 aa17.6■□□□□ 0.41
CAPN1-201ENST00000279247 CROCCQ5TZA2 2017 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 PABPN1LA6NDY0 278 aaKnown RBP17.59■□□□□ 0.41
CAPN1-201ENST00000279247 H3BNX3 289 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 TXNDC9O14530 226 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 SLC2A4P14672 509 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 IDO1P14902 403 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 KCNK10P57789 538 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 RPL38P63173 70 aaKnown RBP17.59■□□□□ 0.41
CAPN1-201ENST00000279247 TRAF3Q13114 568 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 AP5B1Q2VPB7 878 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 ZNF805Q5CZA5 627 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 PCYOX1LQ8NBM8 494 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 VN1R2Q8NFZ6 395 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 CLHC1Q8NHS4 586 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 AP2M1Q96CW1 435 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 SPDL1Q96EA4 605 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 DEC1Q9P2X7 70 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 TBC1D3BA6NDS4 549 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 HEPACAM2A8MVW5 462 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 TRIM38O00635 465 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 SH3BGRLO75368 114 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 OTCP00480 354 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 CTSCP53634 463 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 CDC16Q13042 620 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 DMC1Q14565 340 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 PCBP2Q15366 365 aaKnown RBP eCLIP17.59■□□□□ 0.412e-6■■■□□ 14.7
CAPN1-201ENST00000279247 ZNF284Q2VY69 593 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 RFTN2Q52LD8 501 aaPredicted RBP17.59■□□□□ 0.41
CAPN1-201ENST00000279247 AAGABQ6PD74 315 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 PDPRQ8NCN5 879 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 C1QTNF3Q9BXJ4 246 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 CD244Q9BZW8 370 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 SEMA6AQ9H2E6 1030 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 ACTR8Q9H981 624 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 SDR39U1Q9NRG7 319 aaPredicted RBP17.59■□□□□ 0.41
CAPN1-201ENST00000279247 RIC8BQ9NVN3 520 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 GPR45Q9Y5Y3 372 aa17.59■□□□□ 0.41
CAPN1-201ENST00000279247 CISD3P0C7P0 127 aa17.58■□□□□ 0.41
CAPN1-201ENST00000279247 G6PDP11413 515 aa17.58■□□□□ 0.41
CAPN1-201ENST00000279247 NEK2P51955 445 aa17.58■□□□□ 0.41
CAPN1-201ENST00000279247 LMNTD1Q8N9Z9 388 aa17.58■□□□□ 0.41
CAPN1-201ENST00000279247 SUN2Q9UH99 717 aa17.58■□□□□ 0.41
CAPN1-201ENST00000279247 PPIL1Q9Y3C6 166 aa17.58■□□□□ 0.41
CAPN1-201ENST00000279247 C5orf67F2Z3F1 127 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 STK16O75716 305 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 ANXA5P08758 320 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 UBTFL6P0CB48 400 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-201ENST00000279247 EPB42P16452 691 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 DGKQP52824 942 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 NFYCQ13952 458 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 IMPG1Q17R60 797 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 SFT2D3Q587I9 215 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 RABL3Q5HYI8 236 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 IL23RQ5VWK5 629 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 FBXL19Q6PCT2 694 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 AGAP14A8MT82 685 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 TSPAN6O43657 245 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 WDR47O94967 919 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 HIST1H2AGP0C0S8 130 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-201ENST00000279247 HIST1H2ADP20671 130 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 PTGR1Q14914 329 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 PAGE3Q5JUK9 113 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 RNF175Q8N4F7 328 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 OTUB2Q96DC9 234 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 HIST1H2AHQ96KK5 128 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 TMEM74Q96NL1 305 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 HIST1H2AJQ99878 128 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 H2AFJQ9BTM1 129 aa17.58■□□□□ 0.4
CAPN1-201ENST00000279247 NUSAP1Q9BXS6 441 aaKnown RBP17.58■□□□□ 0.4
CAPN1-201ENST00000279247 K7ESM1 405 aa17.57■□□□□ 0.4
CAPN1-201ENST00000279247 LINC01565O15544 149 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms