RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 DDX60Q8IY21 1712 aaKnown RBP13.5□□□□□ -0.25
NPC1-201ENST00000269228 HLA-DQA2P01906 255 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 PAX7P23759 505 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 CACNA2D1P54289 1103 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.5□□□□□ -0.25
NPC1-201ENST00000269228 PAOXQ6QHF9 649 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 BNIPLQ7Z465 357 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 ZNF784Q8NCA9 323 aaPredicted RBP13.5□□□□□ -0.25
NPC1-201ENST00000269228 METTL21AQ8WXB1 218 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 MIPEPQ99797 713 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 LMAN2LQ9H0V9 348 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 C1orf109Q9NX04 203 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 CNOT6Q9ULM6 557 aaKnown RBP13.5□□□□□ -0.25
NPC1-201ENST00000269228 ZNF487B1APH4 448 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 SOX6P35712 828 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 RPL4P36578 427 aaKnown RBP13.5□□□□□ -0.25
NPC1-201ENST00000269228 PNLIPRP1P54315 467 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 STXBP1P61764 594 aaKnown RBP13.5□□□□□ -0.25
NPC1-201ENST00000269228 DPY19L3Q6ZPD9 716 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 COMMD2Q86X83 199 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 C8orf59Q8N0T1 100 aaPredicted RBP13.5□□□□□ -0.25
NPC1-201ENST00000269228 AGAP11Q8TF27 550 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 NDUFA13Q9P0J0 144 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 LZTS1Q9Y250 596 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 PRKAB1Q9Y478 270 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 SDK1Q7Z5N4 2213 aa13.5□□□□□ -0.25
NPC1-201ENST00000269228 A0A0G2JN53 185 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 H3BNH8 94 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 SCN2BO60939 215 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 CST5P28325 142 aaPredicted RBP13.49□□□□□ -0.25
NPC1-201ENST00000269228 ALDH4A1P30038 563 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 AFF1P51825 1210 aaKnown RBP13.49□□□□□ -0.25
NPC1-201ENST00000269228 WDR5P61964 334 aaKnown RBP13.49□□□□□ -0.25
NPC1-201ENST00000269228 RBM15BQ8NDT2 890 aaKnown RBP13.49□□□□□ -0.25
NPC1-201ENST00000269228 SIGLEC10Q96LC7 697 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 MAGEL2Q9UJ55 1249 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 KCNK6Q9Y257 313 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 COQ6Q9Y2Z9 468 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 SLC25A12O75746 678 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 ITGBL1O95965 494 aaPredicted RBP13.49□□□□□ -0.25
NPC1-201ENST00000269228 C1QTNF8P60827 252 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 CDC42P60953 191 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 RPL26P61254 145 aaKnown RBP13.49□□□□□ -0.25
NPC1-201ENST00000269228 CCDC92Q53HC0 331 aaPredicted RBP13.49□□□□□ -0.25
NPC1-201ENST00000269228 SVOPQ8N4V2 548 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 RORBQ92753 470 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 RAB11FIP5Q9BXF6 653 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 RHBDL2Q9NX52 303 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 RPL26L1Q9UNX3 145 aaKnown RBP13.49□□□□□ -0.25
NPC1-201ENST00000269228 TIAM2Q8IVF5 1701 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 SAP18O00422 153 aaKnown RBP13.49□□□□□ -0.25
NPC1-201ENST00000269228 MYL12BO14950 172 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 KLF8O95600 359 aaPredicted RBP13.49□□□□□ -0.25
NPC1-201ENST00000269228 KRT8P05787 483 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 TCF3P15923 654 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 IDH3AP50213 366 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 HERVK_113P63132 956 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 MACC1Q6ZN28 852 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 VANGL1Q8TAA9 524 aaPredicted RBP13.49□□□□□ -0.25
NPC1-201ENST00000269228 PSKH2Q96QS6 385 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 ERVK-6Q9BXR3 956 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 NUSAP1Q9BXS6 441 aaKnown RBP13.49□□□□□ -0.25
NPC1-201ENST00000269228 PGAP2Q9UHJ9 254 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 CDC7O00311 574 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 ADAMTS4O75173 837 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 TNFAIP8O95379 198 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 IMPDH1P20839 514 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 HSPB3Q12988 150 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 GPRC6AQ5T6X5 926 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 PROSER1Q86XN7 944 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 HPS6Q86YV9 775 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 TTC29Q8NA56 475 aaPredicted RBP13.49□□□□□ -0.25
NPC1-201ENST00000269228 EEF1AKMT1Q8WVE0 214 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 ITM2CQ9NQX7 267 aa13.49□□□□□ -0.25
NPC1-201ENST00000269228 CPED1A4D0V7 1026 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 ZBTB42B2RXF5 422 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 DCLK1O15075 740 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 TCEA3O75764 348 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 FYNP06241 537 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 ANPEPP15144 967 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 STC1P52823 247 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 WDR4P57081 412 aaKnown RBP13.48□□□□□ -0.25
NPC1-201ENST00000269228 DEFA1P59665 94 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 DEFA3P59666 94 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 GLYATQ6IB77 296 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 FITM2Q8N6M3 262 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 C3orf58Q8NDZ4 430 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 TRPV1Q8NER1 839 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 SORCS1Q8WY21 1168 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 SLC47A1Q96FL8 570 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 RBM18Q96H35 190 aaKnown RBP13.48□□□□□ -0.25
NPC1-201ENST00000269228 KIFC1Q9BW19 673 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 SEC14L3Q9UDX4 400 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 SLCO3A1Q9UIG8 710 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 STRCP1A6NGW2 1772 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 EPOP01588 193 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 IL6P05231 212 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 PRPS2P11908 318 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 CREB5Q02930 508 aa13.48□□□□□ -0.25
NPC1-201ENST00000269228 SLC10A2Q12908 348 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms