RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 ALDH4A1P30038 563 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 CD151P48509 253 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 CLCN7P51798 805 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 PGGT1BP53609 377 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 CDKN2DP55273 166 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 RPA4Q13156 261 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 ILKQ13418 452 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 EFTUD2Q15029 972 aaKnown RBP eCLIP12.47□□□□□ -0.415e-13■■■■■ 88.9
SS18-202ENST00000269138 KBTBD12Q3ZCT8 623 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 CYS1Q717R9 158 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 SPRED1Q7Z699 444 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 STRA8Q7Z7C7 330 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 GALNT7Q86SF2 657 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 MARCH9Q86YJ5 346 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 TRIM48Q8IWZ4 208 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 CHCHD4Q8N4Q1 142 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 SIDT2Q8NBJ9 832 aaKnown RBP12.47□□□□□ -0.41
SS18-202ENST00000269138 GIMAP7Q8NHV1 300 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 GABPB2Q8TAK5 448 aaPredicted RBP12.47□□□□□ -0.41
SS18-202ENST00000269138 ASZ1Q8WWH4 475 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 JPH3Q8WXH2 748 aaPredicted RBP12.47□□□□□ -0.41
SS18-202ENST00000269138 TMEM159Q96B96 161 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 ATXN7L3BQ96GX2 97 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 PANX3Q96QZ0 392 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 TBC1D10AQ9BXI6 508 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 TSPYL1Q9H0U9 437 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 CCDC68Q9H2F9 335 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 SLC40A1Q9NP59 571 aa12.47□□□□□ -0.41
SS18-202ENST00000269138 TSR3Q9UJK0 312 aaKnown RBP12.47□□□□□ -0.41
SS18-202ENST00000269138 A0A1W2PQM1 296 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 E5RI56 91 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 FAM155BO75949 473 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 SLCO2B1O94956 709 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 ACSL3O95573 720 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 APOA4P06727 396 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 ACADLP28330 430 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 INSM1Q01101 510 aaPredicted RBP12.46□□□□□ -0.42
SS18-202ENST00000269138 ABRQ12979 859 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 NR1D2Q14995 579 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 AMZ1Q400G9 498 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 ACSBG2Q5FVE4 666 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 NKAIN2Q5VXU1 208 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 ZNF449Q6P9G9 518 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 CEP128Q6ZU80 1094 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 OTOAQ7RTW8 1153 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 PDZD3Q86UT5 571 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 PIM3Q86V86 326 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 SLC26A11Q86WA9 606 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 ZC3HC1Q86WB0 502 aaKnown RBP12.46□□□□□ -0.42
SS18-202ENST00000269138 SLC22A15Q8IZD6 547 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 ZBTB2Q8N680 514 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 ADAMTS14Q8WXS8 1223 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 SLC38A3Q99624 504 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 GPR21Q99679 349 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 NRTNQ99748 197 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 MCMBPQ9BTE3 642 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 ABCG4Q9H172 646 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 LRRN3Q9H3W5 708 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 SYNDIG1Q9H7V2 258 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 LATS2Q9NRM7 1088 aa12.46□□□□□ -0.42
SS18-202ENST00000269138 ATXN7L1Q9ULK2 861 aaPredicted RBP12.46□□□□□ -0.42
SS18-202ENST00000269138 RP1P56715 2156 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 SPAG6O75602 509 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 RPLP0P05388 317 aaKnown RBP12.45□□□□□ -0.42
SS18-202ENST00000269138 PNLIPP16233 465 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 CD1CP29017 333 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 STX2P32856 288 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 E2F1Q01094 437 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 GPR18Q14330 331 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 GBX1Q14549 363 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 TMED2Q15363 201 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 ERCC6LQ2NKX8 1250 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 PLEKHS1Q5SXH7 462 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 HECTD2Q5U5R9 776 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 CCNI2Q6ZMN8 369 aaPredicted RBP12.45□□□□□ -0.42
SS18-202ENST00000269138 TMEM26Q6ZUK4 368 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 USP53Q70EK8 1073 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 RAB44Q7Z6P3 723 aaPredicted RBP12.45□□□□□ -0.42
SS18-202ENST00000269138 CTAGE3PQ8IX95 158 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 PPM1NQ8N819 430 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 GPATCH11Q8N954 259 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 UHMK1Q8TAS1 419 aaKnown RBP12.45□□□□□ -0.42
SS18-202ENST00000269138 TFGQ92734 400 aaPredicted RBP12.45□□□□□ -0.42
SS18-202ENST00000269138 CDKL2Q92772 493 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 KCNJ9Q92806 393 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 FERD3LQ96RJ6 166 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 OLFM1Q99784 485 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 TXLNGYQ9BZA5 131 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 POT1Q9NUX5 634 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 KCNK4Q9NYG8 393 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 RUVBL2Q9Y230 463 aaKnown RBP12.45□□□□□ -0.42
SS18-202ENST00000269138 DHRS7Q9Y394 339 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 COMMD10Q9Y6G5 202 aa12.45□□□□□ -0.42
SS18-202ENST00000269138 IGHV1OR21-1A0A087WYE8 117 aa12.44□□□□□ -0.42
SS18-202ENST00000269138 IFRD1O00458 451 aaPredicted RBP12.44□□□□□ -0.42
SS18-202ENST00000269138 NTN3O00634 580 aaPredicted RBP12.44□□□□□ -0.42
SS18-202ENST00000269138 KPNA5O15131 536 aa12.44□□□□□ -0.42
SS18-202ENST00000269138 HYAL3O43820 417 aaPredicted RBP12.44□□□□□ -0.42
SS18-202ENST00000269138 TNFRSF8P28908 595 aa12.44□□□□□ -0.42
SS18-202ENST00000269138 MAPK9P45984 424 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms