RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 HALP42357 657 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 TMBIM6P55061 237 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 CYP4F3Q08477 520 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 MAP2K5Q13163 448 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 PDCD4Q53EL6 469 aaKnown RBP12.2□□□□□ -0.46
CHMP3-201ENST00000263856 DLEU7Q6UYE1 221 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 NCCRP1Q6ZVX7 275 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-201ENST00000263856 USP51Q70EK9 711 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 EFL1Q7Z2Z2 1120 aaKnown RBP12.2□□□□□ -0.46
CHMP3-201ENST00000263856 GOLGA7Q7Z5G4 137 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 LIX1Q8N485 282 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 CHDHQ8NE62 594 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-201ENST00000263856 ZFP90Q8TF47 636 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 SLC13A3Q8WWT9 602 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 RHNO1Q9BSD3 238 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 MUC13Q9H3R2 512 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 LATS2Q9NRM7 1088 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 WWOXQ9NZC7 414 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 FAM8A1Q9UBU6 413 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 RGS17Q9UGC6 210 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-201ENST00000263856 ERGIC3Q9Y282 383 aa12.2□□□□□ -0.46
CHMP3-201ENST00000263856 H0YAE9 185 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 UPK1AO00322 258 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 CXCR6O00574 342 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 EFNA1P20827 205 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-201ENST00000263856 AKT1P31749 480 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 HTR7P34969 479 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 GTF2H2Q13888 395 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 CTXN3Q4LDR2 81 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 GTF2H2CQ6P1K8 395 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 MBOAT1Q6ZNC8 495 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 TMEM179BQ7Z7N9 219 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 SLC22A15Q8IZD6 547 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 EID3Q8N140 333 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 NDNFQ8TB73 568 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 MCOLN3Q8TDD5 553 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 PPP1R14BQ96C90 147 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 NSMCE3Q96MG7 304 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 DOK1Q99704 481 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 PTPN18Q99952 460 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 TDRD1Q9BXT4 1180 aaKnown RBP12.19□□□□□ -0.46
CHMP3-201ENST00000263856 ZIM2Q9NZV7 527 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 MTRRQ9UBK8 725 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 UBA2Q9UBT2 640 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-201ENST00000263856 ZFP37Q9Y6Q3 630 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-201ENST00000263856 LOC100130705A0A1B0GUX0 176 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 UPK3BL1B0FP48 263 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 UPK3BL2E5RIL1 263 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 SH3BGRLO75368 114 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 SERPINB7O75635 380 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 SEC14L2O76054 403 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 CPNE6O95741 557 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 FAM163BP0C2L3 166 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 PFKLP17858 780 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 OXCT1P55809 520 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 CPSF6Q16630 551 aaKnown RBP eCLIP12.19□□□□□ -0.46
CHMP3-201ENST00000263856 XKR7Q5GH72 579 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 CD300LGQ6UXG3 332 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 FAM151BQ6UXP7 276 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 LRRC8DQ7L1W4 858 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 FAM120BQ96EK7 910 aaKnown RBP12.19□□□□□ -0.46
CHMP3-201ENST00000263856 SLC39A13Q96H72 371 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 ZNF583Q96ND8 569 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 TSSK3Q96PN8 268 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 FAM193BQ96PV7 902 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-201ENST00000263856 OR52E6Q96RD3 313 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 NUSAP1Q9BXS6 441 aaKnown RBP12.19□□□□□ -0.46
CHMP3-201ENST00000263856 SEPT3Q9UH03 358 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 GNPTGQ9UJJ9 305 aa12.19□□□□□ -0.46
CHMP3-201ENST00000263856 PRRC2BQ5JSZ5 2229 aaKnown RBP12.18□□□□□ -0.46
CHMP3-201ENST00000263856 ELOVL7A1L3X0 281 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 KRBA1A5PL33 1030 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 A8MU76 341 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 CLDN25C9JDP6 229 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 NDUFS2O75306 463 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 TULP3O75386 442 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 GGT1P19440 569 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 TACR2P21452 398 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 PWP1Q13610 501 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 SKIV2LQ15477 1246 aaKnown RBP12.18□□□□□ -0.46
CHMP3-201ENST00000263856 TRIP4Q15650 581 aaPredicted RBP12.18□□□□□ -0.46
CHMP3-201ENST00000263856 CTSL3PQ5NE16 218 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 ARTNQ5T4W7 220 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 RIMKLAQ8IXN7 391 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 PNPT1Q8TCS8 783 aaKnown RBP12.18□□□□□ -0.46
CHMP3-201ENST00000263856 CD200R1Q8TD46 325 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 TRUB1Q8WWH5 349 aaKnown RBP12.18□□□□□ -0.46
CHMP3-201ENST00000263856 C1orf74Q96LT6 269 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 PKMYT1Q99640 499 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 GPR63Q9BZJ6 419 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 BRINP2Q9C0B6 783 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 FBXO44Q9H4M3 255 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 TMEM9Q9P0T7 183 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 ERVK-18Q9QC07 812 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 TSC22D4Q9Y3Q8 395 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 NT5C1B-RDH14C9J2C7 533 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 hCG_2039718K7EN88 272 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 SLC1A7O00341 560 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 BCKDKO14874 412 aa12.18□□□□□ -0.46
CHMP3-201ENST00000263856 PRAMEF11O60813 436 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms