RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 ALDH9A1P49189 494 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 ACADVLP49748 655 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 BCAP31P51572 246 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 DLG1Q12959 904 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 ANKRD39Q53RE8 183 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 RAB41Q5JT25 222 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 ARMC4Q5T2S8 1044 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 ARMC12Q5T9G4 340 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 GPRIN3Q6ZVF9 776 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 ACTRT2Q8TDY3 377 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 OVCA2Q8WZ82 227 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 C19orf60Q96EN9 201 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 PLEKHA8Q96JA3 519 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 MAGED4Q96JG8 741 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 TEKT5Q96M29 485 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 UGT2B28Q9BY64 529 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 TBC1D30Q9Y2I9 924 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 SNX8Q9Y5X2 465 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 LCHNA4D1U4 455 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 UBXN8O00124 270 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 DNAJB1P25685 340 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 GPC1P35052 558 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 NUBP1P53384 320 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 BCL2L1Q07817 233 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 ZYG11AQ6WRX3 759 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 C8orf59Q8N0T1 100 aaPredicted RBP9.42□□□□□ -0.9
SIM1-201ENST00000262901 CPSF7Q8N684 471 aaKnown RBP9.42□□□□□ -0.9
SIM1-201ENST00000262901 MRPL43Q8N983 215 aaKnown RBP9.42□□□□□ -0.9
SIM1-201ENST00000262901 ADCY4Q8NFM4 1077 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 CLP1Q92989 425 aaKnown RBP9.42□□□□□ -0.9
SIM1-201ENST00000262901 ASB2Q96Q27 587 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 CYP2S1Q96SQ9 504 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 GPATCH1Q9BRR8 931 aaKnown RBP9.42□□□□□ -0.9
SIM1-201ENST00000262901 MLPHQ9BV36 600 aaPredicted RBP9.42□□□□□ -0.9
SIM1-201ENST00000262901 OSBPL11Q9BXB4 747 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 TXLNGYQ9BZA5 131 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 PNPLA3Q9NST1 481 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 MRPS23Q9Y3D9 190 aaKnown RBP9.42□□□□□ -0.9
SIM1-201ENST00000262901 TRIP11Q15643 1979 aa9.42□□□□□ -0.9
SIM1-201ENST00000262901 HNRNPCL2B2RXH8 293 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 TGM5O43548 720 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 ULK1O75385 1050 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 SIX3O95343 332 aaPredicted RBP9.41□□□□□ -0.9
SIM1-201ENST00000262901 GSNP06396 782 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 CYP4B1P13584 511 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 APEHP13798 732 aaKnown RBP9.41□□□□□ -0.9
SIM1-201ENST00000262901 CHI3L1P36222 383 aaPredicted RBP9.41□□□□□ -0.9
SIM1-201ENST00000262901 SLC16A1P53985 500 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 SLC18A2Q05940 514 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 ZNF252P-AS1Q0IIN9 211 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 TRIP4Q15650 581 aaPredicted RBP9.41□□□□□ -0.9
SIM1-201ENST00000262901 SNAP47Q5SQN1 464 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 C16orf54Q6UWD8 224 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 PLD6Q8N2A8 252 aaKnown RBP9.41□□□□□ -0.9
SIM1-201ENST00000262901 STX19Q8N4C7 294 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 NKAPQ8N5F7 415 aaKnown RBP9.41□□□□□ -0.9
SIM1-201ENST00000262901 SMG7Q92540 1137 aaKnown RBP9.41□□□□□ -0.9
SIM1-201ENST00000262901 UTP4Q969X6 686 aaKnown RBP9.41□□□□□ -0.9
SIM1-201ENST00000262901 NTAN1Q96AB6 310 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 DHRS9Q9BPW9 319 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 LMAN2LQ9H0V9 348 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 SMOC2Q9H3U7 446 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 PCDHGC4Q9Y5F7 938 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 MAP1BP46821 2468 aaKnown RBP9.41□□□□□ -0.9
SIM1-201ENST00000262901 FAM159BA6NKW6 160 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 LZTS3O60299 673 aaPredicted RBP9.41□□□□□ -0.9
SIM1-201ENST00000262901 MSH3P20585 1137 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 PCSK6P29122 969 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 SLC1A2P43004 574 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 HK2P52789 917 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 DEFA1P59665 94 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 DEFA3P59666 94 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 SKIV2LQ15477 1246 aaKnown RBP9.41□□□□□ -0.9
SIM1-201ENST00000262901 LDLRAP1Q5SW96 308 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 ZNF697Q5TEC3 545 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 ABRAXAS1Q6UWZ7 409 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 FAM151BQ6UXP7 276 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 LINGO4Q6UY18 593 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 LEMD2Q8NC56 503 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 OR9I1Q8NGQ6 314 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 SPPL3Q8TCT6 385 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 PSMG2Q969U7 264 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 TIFAQ96CG3 184 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 ITPKCQ96DU7 683 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 TSSK3Q96PN8 268 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 CTRCQ99895 268 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 FAM126AQ9BYI3 521 aaPredicted RBP9.41□□□□□ -0.9
SIM1-201ENST00000262901 MRPS26Q9BYN8 205 aaKnown RBP9.41□□□□□ -0.9
SIM1-201ENST00000262901 COQ10BQ9H8M1 238 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 MARCH7Q9H992 704 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 SACM1LQ9NTJ5 587 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 FBXW11Q9UKB1 542 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 POLHQ9Y253 713 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 USP3Q9Y6I4 520 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 A0A1W2PRQ8 180 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 NPEPPSL1A6NEC2 478 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 E9PAM4 449 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 H3BMM5 538 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 RGS14O43566 566 aa9.41□□□□□ -0.9
SIM1-201ENST00000262901 CNOT3O75175 753 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms