RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 RNF11Q9Y3C5 154 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 CEPT1Q9Y6K0 416 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 FFAR2O15552 330 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 LEFTY1O75610 366 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 SLC2A4P14672 509 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 DGKQP52824 942 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 FOXD4Q12950 439 aaPredicted RBP14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 SFTPA1Q8IWL2 248 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 AHI1Q8N157 1196 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 RNF175Q8N4F7 328 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 FATE1Q969F0 183 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 EPB41L1Q9H4G0 881 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 MEAF6Q9HAF1 191 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 SAGE1Q9NXZ1 904 aa14.4□□□□□ -0.1
TRAFD1-201ENST00000257604 SPEGQ15772 3267 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 ARHGAP10A1A4S6 786 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 PABPN1LA6NDY0 278 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 PRORSD1PA6NEY8 169 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 TSPAN12O95859 305 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 EFEMP2O95967 443 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 ESR1P03372 595 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 LBPP18428 481 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 POLR2EP19388 210 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 GRIA3P42263 894 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 RGS4P49798 205 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 ENTPD1P49961 510 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 ERVPABLB-1P60509 514 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 ABRQ12979 859 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 SQLEQ14534 574 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 RABL3Q5HYI8 236 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 ALG1LQ6GMV1 187 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 HTR3DQ70Z44 454 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 LPCAT2Q7L5N7 544 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 RETREG3Q86VR2 466 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 RALGPS2Q86X27 583 aaPredicted RBP14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 RBFAQ8N0V3 343 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 MIER2Q8N344 545 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 MRPL43Q8N983 215 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 DLG3Q92796 817 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 IRF7Q92985 503 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 FAR2Q96K12 515 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 SEZ6LQ9BYH1 1024 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 CRISPLD2Q9H0B8 497 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 CROTQ9UKG9 612 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 USP22Q9UPT9 525 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 ZNF821O75541 412 aaPredicted RBP14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 PTPN2P17706 415 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 SPAM1P38567 509 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 NNMTP40261 264 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 ATP6V0D1P61421 351 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 PLOD1Q02809 727 aaPredicted RBP14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 FPGSQ05932 587 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 DCTN2Q13561 401 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 ARHGAP15Q53QZ3 475 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 KLHL35Q6PF15 583 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 USP45Q70EL2 814 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 LARP4Q71RC2 724 aaKnown RBP eCLIP14.39□□□□□ -0.111e-6■■■■□ 24.9
TRAFD1-201ENST00000257604 FUNDC1Q8IVP5 155 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 OR4F6Q8NGB9 312 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 OR56A4Q8NGH8 313 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 FIBINQ8TAL6 211 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 TCF12Q99081 682 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 COPS8Q99627 209 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 YIPF2Q9BWQ6 316 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 RC3H2Q9HBD1 1191 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 MAGEE1Q9HCI5 957 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 VPS9D1Q9Y2B5 631 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 OAS3Q9Y6K5 1087 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 PLXNA3P51805 1871 aa14.39□□□□□ -0.11
TRAFD1-201ENST00000257604 GNAO1P09471 354 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 CEBPBP17676 345 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 CAPN3P20807 821 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 YAP1P46937 504 aaKnown RBP14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 CLCN7P51798 805 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 EMP3P54852 163 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 NR1H2P55055 460 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 NFYCQ13952 458 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 CRY1Q16526 586 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 IMPG1Q17R60 797 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 TMEM215Q68D42 235 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 CLVS1Q8IUQ0 354 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 C2orf73Q8N5S3 287 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 LILRA3Q8N6C8 439 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 ADCY4Q8NFM4 1077 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 OR2T11Q8NH01 316 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 ZNF696Q9H7X3 374 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 EBF1Q9UH73 591 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 PCTPQ9UKL6 214 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 POLR3HQ9Y535 204 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 SCAMP1O15126 338 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 CA3P07451 260 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 RPL38P63173 70 aaKnown RBP14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 SLC14A2Q15849 920 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 SNX20Q7Z614 316 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 PGAM4Q8N0Y7 254 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 ZNF786Q8N393 782 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 TMEM102Q8N9M5 508 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 KCNJ9Q92806 393 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 L3HYPDHQ96EM0 354 aa14.38□□□□□ -0.11
TRAFD1-201ENST00000257604 PPM1MQ96MI6 270 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms