RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 RPS6KL1Q9Y6S9 549 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 WDFY3Q8IZQ1 3526 aa8.33□□□□□ -1.08
TMEM258-201ENST00000257262 SLC5A10A0PJK1 596 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 LILRA5A6NI73 299 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 IQCF5A8MTL0 148 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 A8MU76 341 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 EFCAB8A8MWE9 144 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 LIN7AO14910 233 aaPredicted RBP8.32□□□□□ -1.08
TMEM258-201ENST00000257262 NDUFS3O75489 264 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 BANF1O75531 89 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 URI1O94763 535 aaPredicted RBP8.32□□□□□ -1.08
TMEM258-201ENST00000257262 USP1O94782 785 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 UBXN7O94888 489 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 GSTM1P09488 218 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 AMD1P17707 334 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 ITGB6P18564 788 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 CCR7P32248 378 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 PREPP48147 710 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 ITGA8P53708 1063 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 GSTM4Q03013 218 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 BOP1Q14137 746 aaKnown RBP8.32□□□□□ -1.08
TMEM258-201ENST00000257262 C16orf72Q14CZ0 275 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 SNAP47Q5SQN1 464 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 MRNIPQ6NTE8 343 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 HIBCHQ6NVY1 386 aaPredicted RBP8.32□□□□□ -1.08
TMEM258-201ENST00000257262 DUS1LQ6P1R4 473 aaKnown RBP8.32□□□□□ -1.08
TMEM258-201ENST00000257262 ZNF449Q6P9G9 518 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 WDR74Q6RFH5 385 aaPredicted RBP8.32□□□□□ -1.08
TMEM258-201ENST00000257262 LIAT1Q6ZQX7 453 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 CENPUQ71F23 418 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 SDCCAG8Q86SQ7 713 aaPredicted RBP8.32□□□□□ -1.08
TMEM258-201ENST00000257262 LSMEM2Q8N112 164 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 KRT222Q8N1A0 295 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 FBXO39Q8N4B4 442 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 OTUD6BQ8N6M0 293 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 PHC3Q8NDX5 983 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 LKAAEAR1Q8TD35 194 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 ZNF592Q92610 1267 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 TRIM44Q96DX7 344 aaPredicted RBP8.32□□□□□ -1.08
TMEM258-201ENST00000257262 STAMBPL1Q96FJ0 436 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 CCDC74BQ96LY2 380 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 RMDN2Q96LZ7 410 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 SLC46A1Q96NT5 459 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 FERD3LQ96RJ6 166 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 DPYSL5Q9BPU6 564 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 CARD6Q9BX69 1037 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 OR52A5Q9H2C5 316 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 EPB41L1Q9H4G0 881 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 PDP2Q9P2J9 529 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 KLHL3Q9UH77 587 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 SNX24Q9Y343 169 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 LOXL2Q9Y4K0 774 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 PCDHGA8Q9Y5G5 932 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 FAM169AQ9Y6X4 670 aa8.32□□□□□ -1.08
TMEM258-201ENST00000257262 ACACBO00763 2458 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 MAP1BP46821 2468 aaKnown RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 CHD6Q8TD26 2715 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 ASPMQ8IZT6 3477 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 UBA6A0AVT1 1052 aaPredicted RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 SRRM3A6NNA2 597 aaPredicted RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 F8W8V4 182 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 IFRD1O00458 451 aaPredicted RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 PRMT5O14744 637 aaPredicted RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 PLD2O14939 933 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 TP73O15350 636 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 CAPN5O15484 640 aaPredicted RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 RAD51CO43502 376 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 TLX3O43711 291 aaPredicted RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 DXOO77932 396 aaKnown RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 SEC31AO94979 1220 aaKnown RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 TNFSF15O95150 251 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 JMJD7P0C870 316 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 THRAP10827 490 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 ITIH1P19827 911 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 RBMS1P29558 406 aaKnown RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 FMO4P31512 558 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 ETV5P41161 510 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 ELK3P41970 407 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 RPL21P46778 160 aaKnown RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 CD151P48509 253 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 MAPK10P53779 464 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 CSE1LP55060 971 aaKnown RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 GFERP55789 205 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 EIF3BP55884 814 aaKnown RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 RPA4Q13156 261 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 EIF3IQ13347 325 aaKnown RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 CTBP1Q13363 440 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 TRA2AQ13595 282 aaKnown RBP eCLIP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 THOC5Q13769 683 aaKnown RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 KRT33BQ14525 404 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 MORF4L2Q15014 288 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 LONRF1Q17RB8 773 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 TYSND1Q2T9J0 566 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 BBS9Q3SYG4 887 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 SYTL3Q4VX76 610 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 ZNF789Q5FWF6 425 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 HP1BP3Q5SSJ5 553 aaPredicted RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 PTRHD1Q6GMV3 140 aaKnown RBP8.31□□□□□ -1.08
TMEM258-201ENST00000257262 NEPROQ6NW34 567 aa8.31□□□□□ -1.08
TMEM258-201ENST00000257262 MAATS1Q7Z4T9 603 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms