RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 PTBP2Q9UKA9 531 aaKnown RBP18.38■□□□□ 0.53
PDLIM4-201ENST00000253754 FFAR3O14843 346 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 ARPC2O15144 300 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 GPR42O15529 346 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 AKAP10O43572 662 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 TPST1O60507 370 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 XYLBO75191 536 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 EEDO75530 441 aaKnown RBP18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 PGM3O95394 542 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 STAMBPO95630 424 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 SMIM18P0DKX4 95 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 G6PDP11413 515 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 HSD17B1P14061 328 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 NCK1P16333 377 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 CKMT2P17540 419 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 CSNK1DP48730 415 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 RGS4P49798 205 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 NR6A1Q15406 480 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 PDCD4Q53EL6 469 aaKnown RBP18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 MPP7Q5T2T1 576 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 TMEM25Q86YD3 366 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 FAM126AQ9BYI3 521 aaPredicted RBP18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 PIF1Q9H611 641 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 ZDHHC6Q9H6R6 413 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 MBD1Q9UIS9 605 aaPredicted RBP18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 OARD1Q9Y530 152 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 TNPO3Q9Y5L0 923 aaKnown RBP18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 SCN8AQ9UQD0 1980 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 FAM149AA5PLN7 773 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 LSM1O15116 133 aaKnown RBP18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 DGKAP23743 735 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 HOXA9P31269 272 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 GSK3BP49841 420 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 MYBPC1Q00872 1141 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 MYLK3Q32MK0 819 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 RFTN2Q52LD8 501 aaPredicted RBP18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 COQ5Q5HYK3 327 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 PDE12Q6L8Q7 609 aaKnown RBP18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 TRAPPC9Q96Q05 1148 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 UHRF1Q96T88 793 aaPredicted RBP18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 TSC22D3Q99576 134 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 PBX4Q9BYU1 374 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 ACTL8Q9H568 366 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 LATS2Q9NRM7 1088 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 FARSBQ9NSD9 589 aaKnown RBP18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 SLCO3A1Q9UIG8 710 aa18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 POLR3HQ9Y535 204 aaPredicted RBP18.37■□□□□ 0.53
PDLIM4-201ENST00000253754 RSL1D1O76021 490 aaKnown RBP18.36■□□□□ 0.53
PDLIM4-201ENST00000253754 FGF19O95750 216 aa18.36■□□□□ 0.53
PDLIM4-201ENST00000253754 HNRNPA1P09651 372 aaKnown RBP eCLIP18.36■□□□□ 0.53
PDLIM4-201ENST00000253754 MRPL19P49406 292 aaKnown RBP18.36■□□□□ 0.53
PDLIM4-201ENST00000253754 PTSQ03393 145 aa18.36■□□□□ 0.53
PDLIM4-201ENST00000253754 ATP13A5Q4VNC0 1218 aa18.36■□□□□ 0.53
PDLIM4-201ENST00000253754 LIN52Q52LA3 116 aa18.36■□□□□ 0.53
PDLIM4-201ENST00000253754 GRAMD4Q6IC98 578 aa18.36■□□□□ 0.53
PDLIM4-201ENST00000253754 C22orf39Q6P5X5 142 aa18.36■□□□□ 0.53
PDLIM4-201ENST00000253754 MACC1Q6ZN28 852 aa18.36■□□□□ 0.53
PDLIM4-201ENST00000253754 MILR1Q7Z6M3 343 aa18.36■□□□□ 0.53
PDLIM4-201ENST00000253754 TRIM54Q9BYV2 358 aa18.36■□□□□ 0.53
PDLIM4-201ENST00000253754 ALG2Q9H553 416 aa18.36■□□□□ 0.53
PDLIM4-201ENST00000253754 WWOXQ9NZC7 414 aa18.36■□□□□ 0.53
PDLIM4-201ENST00000253754 ZNF510Q9Y2H8 683 aa18.36■□□□□ 0.53
PDLIM4-201ENST00000253754 OTCP00480 354 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 UGT2B4P06133 528 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 PFKLP17858 780 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 SNRPD1P62314 119 aaKnown RBP18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 B4GALNT1Q00973 533 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 PLIN5Q00G26 463 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 LIPEQ05469 1076 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 ARHGAP15Q53QZ3 475 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 TBCELQ5QJ74 424 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 IYDQ6PHW0 289 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 DPY19L3Q6ZPD9 716 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 ASIC4Q96FT7 647 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 ZIM2Q9NZV7 527 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 SUN2Q9UH99 717 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 CD84Q9UIB8 345 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 LEF1Q9UJU2 399 aaPredicted RBP18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 DHRS12A0PJE2 317 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 FAM234BA2RU67 622 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 NEDD8-MDP1E9PL57 170 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 AP1G1O43747 822 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 PSMC3P17980 439 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 HMOX2P30519 316 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 DGKQP52824 942 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 FOXM1Q08050 763 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 GRIK2Q13002 908 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 AP5B1Q2VPB7 878 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 SATL1Q86VE3 508 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 ZFAND4Q86XD8 727 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 C12orf76Q8N812 135 aaPredicted RBP18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 CHST14Q8NCH0 376 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 ZUFSPQ96AP4 578 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 RHBDF1Q96CC6 855 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 SCRN2Q96FV2 425 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 SUV39H2Q9H5I1 410 aa18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 CCM2LQ9NUG4 571 aaPredicted RBP18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 HELZP42694 1942 aaKnown RBP18.35■□□□□ 0.53
PDLIM4-201ENST00000253754 A0A1B0GTW7 788 aa18.34■□□□□ 0.53
PDLIM4-201ENST00000253754 SAC3D1A6NKF1 404 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms