RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 SPATA19Q7Z5L4 167 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 GPR63Q9BZJ6 419 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 TBCCD1Q9NVR7 557 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 KCNH4Q9UQ05 1017 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 PCDHB9Q9Y5E1 797 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 SIP14410 1827 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 MROH6A6NGR9 719 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 BCKDKO14874 412 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 TBX1O43435 398 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 SEC24AO95486 1093 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 ALPIP09923 528 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 ATP4BP51164 291 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 MRPS6P82932 125 aaKnown RBP16.6■□□□□ 0.25
SGPP1-201ENST00000247225 TRIM32Q13049 653 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 NPTX1Q15818 432 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 TMEM53Q6P2H8 277 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 EID3Q8N140 333 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 MDGA1Q8NFP4 955 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 CAPSLQ8WWF8 208 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 PYCR2Q96C36 320 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 TLR9Q9NR96 1032 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 MAGEL2Q9UJ55 1249 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 POU2F3Q9UKI9 436 aa16.6■□□□□ 0.25
SGPP1-201ENST00000247225 CXCR6O00574 342 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 EEDO75530 441 aaKnown RBP16.59■□□□□ 0.25
SGPP1-201ENST00000247225 MYO1DO94832 1006 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 CPSF4O95639 269 aaKnown RBP16.59■□□□□ 0.25
SGPP1-201ENST00000247225 NTRK1P04629 796 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 RHOQP17081 205 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 AKT1P31749 480 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 CYP2C18P33260 490 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 EEFSECP57772 596 aaKnown RBP16.59■□□□□ 0.25
SGPP1-201ENST00000247225 EMX2Q04743 252 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 Q6ZPB1 254 aaPredicted RBP16.59■□□□□ 0.25
SGPP1-201ENST00000247225 RNF175Q8N4F7 328 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 ATP6V0D2Q8N8Y2 350 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 MRM3Q9HC36 420 aaKnown RBP16.59■□□□□ 0.25
SGPP1-201ENST00000247225 HMG20AQ9NP66 347 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 SCUBE2Q9NQ36 999 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 ATP11BQ9Y2G3 1177 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 FAM20BO75063 409 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 GSTT2P0CG29 244 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 GSTT2BP0CG30 244 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 EPHA2P29317 976 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 GKP32189 559 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 PROSER1Q86XN7 944 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 STON2Q8WXE9 905 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 ASB2Q96Q27 587 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 UGT2B28Q9BY64 529 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 ATAD3AQ9NVI7 634 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 CPQQ9Y646 472 aa16.59■□□□□ 0.25
SGPP1-201ENST00000247225 SF1Q15637 639 aaKnown RBP16.58■□□□□ 0.25
SGPP1-201ENST00000247225 COLEC12Q5KU26 742 aa16.58■□□□□ 0.25
SGPP1-201ENST00000247225 DHRS4L2Q6PKH6 230 aa16.58■□□□□ 0.25
SGPP1-201ENST00000247225 DENND1CQ8IV53 801 aa16.58■□□□□ 0.25
SGPP1-201ENST00000247225 CADM3Q8N126 398 aa16.58■□□□□ 0.25
SGPP1-201ENST00000247225 NETO1Q8TDF5 533 aa16.58■□□□□ 0.25
SGPP1-201ENST00000247225 SLC13A3Q8WWT9 602 aa16.58■□□□□ 0.25
SGPP1-201ENST00000247225 DUS3LQ96G46 650 aaKnown RBP16.58■□□□□ 0.25
SGPP1-201ENST00000247225 ATP13A1Q9HD20 1204 aa16.58■□□□□ 0.25
SGPP1-201ENST00000247225 GKN1Q9NS71 199 aa16.58■□□□□ 0.25
SGPP1-201ENST00000247225 SLC6A13Q9NSD5 602 aa16.58■□□□□ 0.25
SGPP1-201ENST00000247225 DOCK3Q8IZD9 2030 aa16.58■□□□□ 0.25
SGPP1-201ENST00000247225 ELOVL7A1L3X0 281 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 MBLAC1A4D2B0 266 aaPredicted RBP16.58■□□□□ 0.24
SGPP1-201ENST00000247225 PGLSO95336 258 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 PAPSS2O95340 614 aaPredicted RBP16.58■□□□□ 0.24
SGPP1-201ENST00000247225 MATN4O95460 622 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 MLYCDO95822 493 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 NUDT6P53370 316 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 GALNT1Q10472 559 aaPredicted RBP16.58■□□□□ 0.24
SGPP1-201ENST00000247225 DPY19L1Q2PZI1 675 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 GDF6Q6KF10 455 aaPredicted RBP16.58■□□□□ 0.24
SGPP1-201ENST00000247225 SLC16A10Q8TF71 515 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 NSMCE3Q96MG7 304 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 ZNF583Q96ND8 569 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 BOCQ9BWV1 1114 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 PAK1IP1Q9NWT1 392 aaPredicted RBP16.58■□□□□ 0.24
SGPP1-201ENST00000247225 SLC1A7O00341 560 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 CHRNA1P02708 482 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 HTR1AP08908 422 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 ENO2P09104 434 aaPredicted RBP16.58■□□□□ 0.24
SGPP1-201ENST00000247225 GTF2E2P29084 291 aaKnown RBP16.58■□□□□ 0.24
SGPP1-201ENST00000247225 ZXDBP98169 803 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 EMX1Q04741 257 aaPredicted RBP16.58■□□□□ 0.24
SGPP1-201ENST00000247225 SKIV2LQ15477 1246 aaKnown RBP16.58■□□□□ 0.24
SGPP1-201ENST00000247225 CES5AQ6NT32 575 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 C10orf111Q8N326 155 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 POC5Q8NA72 575 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 TRUB1Q8WWH5 349 aaKnown RBP16.58■□□□□ 0.24
SGPP1-201ENST00000247225 RUBCNLQ9H714 662 aa16.58■□□□□ 0.24
SGPP1-201ENST00000247225 GLUD1P00367 558 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 FGF1P05230 155 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 LCKP06239 509 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 UMPSP11172 480 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 HOXD12P35452 270 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 TMBIM6P55061 237 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 IFITM3Q01628 133 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 GTF2H2Q13888 395 aa16.57■□□□□ 0.24
SGPP1-201ENST00000247225 MAPRE1Q15691 268 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms