RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 RANBP1P43487 201 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 FOXM1Q08050 763 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 IMPG1Q17R60 797 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 AASDHQ4L235 1098 aaPredicted RBP14.37□□□□□ -0.11
CNOT3-201ENST00000221232 SPANXN4Q5MJ08 99 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 ACBD5Q5T8D3 534 aaPredicted RBP14.37□□□□□ -0.11
CNOT3-201ENST00000221232 SLC8B1Q6J4K2 584 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 ITIH5Q86UX2 942 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 TBC1D21Q8IYX1 336 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 LIX1Q8N485 282 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 MYLIPQ8WY64 445 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 SGCDQ92629 289 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 PYCR2Q96C36 320 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 ULK4Q96C45 1275 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 C1QTNF3Q9BXJ4 246 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 SMG9Q9H0W8 520 aaKnown RBP14.37□□□□□ -0.11
CNOT3-201ENST00000221232 NUDT4Q9NZJ9 180 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 ZNF490Q9ULM2 529 aaPredicted RBP14.37□□□□□ -0.11
CNOT3-201ENST00000221232 YIPF1Q9Y548 306 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 CPQQ9Y646 472 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 U3KQV3 271 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 PLXNA3P51805 1871 aa14.37□□□□□ -0.11
CNOT3-201ENST00000221232 PRKACGP22612 351 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 CDK9P50750 372 aaKnown RBP14.36□□□□□ -0.11
CNOT3-201ENST00000221232 EEFSECP57772 596 aaKnown RBP14.36□□□□□ -0.11
CNOT3-201ENST00000221232 CYP4F8P98187 520 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 BCL2L1Q07817 233 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 TRAF3Q13114 568 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 TMEM259Q4ZIN3 620 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 GCNT7Q6ZNI0 430 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 SPRED1Q7Z699 444 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 TMBIM1Q969X1 311 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 PREBQ9HCU5 417 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 ATXN10Q9UBB4 475 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 MTRRQ9UBK8 725 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 OPTCQ9UBM4 332 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 CIDEBQ9UHD4 219 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 A0A1W2PQ67 120 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 GAPDHSO14556 408 aaPredicted RBP14.36□□□□□ -0.11
CNOT3-201ENST00000221232 LRATO95237 230 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 PGLSO95336 258 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 OTCP00480 354 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 ENO2P09104 434 aaPredicted RBP14.36□□□□□ -0.11
CNOT3-201ENST00000221232 BPIP17213 487 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 CAPGP40121 348 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 MTHFRP42898 656 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 STK19P49842 368 aaPredicted RBP14.36□□□□□ -0.11
CNOT3-201ENST00000221232 SMARCB1Q12824 385 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 NFATC2Q13469 925 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 CHST9Q7L1S5 443 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 ADAMTSL2Q86TH1 951 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 PDZD8Q8NEN9 1154 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 ZNF461Q8TAF7 563 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 C12orf43Q96C57 262 aaKnown RBP14.36□□□□□ -0.11
CNOT3-201ENST00000221232 FAM126AQ9BYI3 521 aaPredicted RBP14.36□□□□□ -0.11
CNOT3-201ENST00000221232 ADNPQ9H2P0 1102 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 ELAC1Q9H777 363 aaKnown RBP14.36□□□□□ -0.11
CNOT3-201ENST00000221232 NTN4Q9HB63 628 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 ZNF334Q9HCZ1 680 aaPredicted RBP14.36□□□□□ -0.11
CNOT3-201ENST00000221232 SLC6A13Q9NSD5 602 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 GNGT2O14610 69 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 GMNNO75496 209 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 ALBP02768 609 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 PIGFQ07326 219 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 COQ5Q5HYK3 327 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 ABRAXAS1Q6UWZ7 409 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 TMEM26Q6ZUK4 368 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 KCTD8Q6ZWB6 473 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 ZSWIM9Q86XI8 627 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 PTRH1Q86Y79 214 aaKnown RBP14.36□□□□□ -0.11
CNOT3-201ENST00000221232 RNF175Q8N4F7 328 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 HM13Q8TCT9 377 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 ABTB1Q969K4 478 aaPredicted RBP14.36□□□□□ -0.11
CNOT3-201ENST00000221232 NCLNQ969V3 563 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 BDH2Q9BUT1 245 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 DPY30Q9C005 99 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 CXorf21Q9HAI6 301 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 EXD2Q9NVH0 621 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 ADGRE2Q9UHX3 823 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 CD84Q9UIB8 345 aa14.36□□□□□ -0.11
CNOT3-201ENST00000221232 ULK1O75385 1050 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 MTX2O75431 263 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 HTR1EP28566 365 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 CTSOP43234 321 aaPredicted RBP14.35□□□□□ -0.11
CNOT3-201ENST00000221232 TMED1Q13445 227 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 MAPKAPK3Q16644 382 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 RGL4Q8IZJ4 473 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 STK40Q8N2I9 435 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 LRRC43Q8N309 656 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 ISOC1Q96CN7 298 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 ZNF583Q96ND8 569 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 NPLQ9BXD5 320 aaPredicted RBP14.35□□□□□ -0.11
CNOT3-201ENST00000221232 SEZ6LQ9BYH1 1024 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 HMX1Q9NP08 348 aaPredicted RBP14.35□□□□□ -0.11
CNOT3-201ENST00000221232 COMMD8Q9NX08 183 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 MBD1Q9UIS9 605 aaPredicted RBP14.35□□□□□ -0.11
CNOT3-201ENST00000221232 TNPO3Q9Y5L0 923 aaKnown RBP14.35□□□□□ -0.11
CNOT3-201ENST00000221232 MAGEB3O15480 346 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 FZD6O60353 706 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 SH3BGRLO75368 114 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms