RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 DBF4BQ8NFT6 615 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 OR2T12Q8NG77 320 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 OR8J3Q8NGG0 315 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 OR10A6Q8NH74 314 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 SDCCAG3Q96C92 435 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 FBXL8Q96CD0 374 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 COX4I2Q96KJ9 171 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 THUMPD3Q9BV44 507 aaKnown RBP16.99■□□□□ 0.31
USB1-201ENST00000219281 UGT2B28Q9BY64 529 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 HPS4Q9NQG7 708 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 FAM118AQ9NWS6 357 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 HCSTQ9UBK5 93 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 LIMD1Q9UGP4 676 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 UTS2RQ9UKP6 389 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 PCDHGA8Q9Y5G5 932 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 GBF1Q92538 1859 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 BOLA2-SMG1P6H3BVE0 249 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 CBX4O00257 560 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 IFRD1O00458 451 aaPredicted RBP16.98■□□□□ 0.31
USB1-201ENST00000219281 BCL10O95999 233 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 CST1P01037 141 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 TPD52P55327 224 aaPredicted RBP16.98■□□□□ 0.31
USB1-201ENST00000219281 MRPL58Q14197 206 aaKnown RBP16.98■□□□□ 0.31
USB1-201ENST00000219281 PCBP2Q15366 365 aaKnown RBP eCLIP16.98■□□□□ 0.313e-13■■■■■ 34
USB1-201ENST00000219281 C5orf22Q49AR2 442 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 RBM48Q5RL73 367 aaKnown RBP16.98■□□□□ 0.31
USB1-201ENST00000219281 ANKRD34AQ69YU3 496 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 LRRC8DQ7L1W4 858 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 RBM12BQ8IXT5 1001 aaKnown RBP16.98■□□□□ 0.31
USB1-201ENST00000219281 NRBF2Q96F24 287 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 AURKBQ96GD4 344 aaPredicted RBP16.98■□□□□ 0.31
USB1-201ENST00000219281 FAM193BQ96PV7 902 aaPredicted RBP16.98■□□□□ 0.31
USB1-201ENST00000219281 CSF3RQ99062 836 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 IPPKQ9H8X2 491 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 HMX1Q9NP08 348 aaPredicted RBP16.98■□□□□ 0.31
USB1-201ENST00000219281 TMEM161AQ9NX61 479 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 ADGRE2Q9UHX3 823 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 H3BNC9 293 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 CBFA2T3O75081 653 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 HPRP00739 348 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 JAK1P23458 1154 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 CDH4P55283 916 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 RPL38P63173 70 aaKnown RBP16.98■□□□□ 0.31
USB1-201ENST00000219281 BFSP2Q13515 415 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 TUBA3CQ13748 450 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 PTGR1Q14914 329 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 KIAA0040Q15053 153 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 MEP1AQ16819 746 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 NECAB2Q7Z6G3 386 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 MILR1Q7Z6M3 343 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 SPARTQ8N0X7 666 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 SLC15A4Q8N697 577 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 MBOAT4Q96T53 435 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 GORASP2Q9H8Y8 452 aa16.98■□□□□ 0.31
USB1-201ENST00000219281 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.98■□□□□ 0.31
USB1-201ENST00000219281 MTMR11A4FU01 709 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 GNGT2O14610 69 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 SYN3O14994 580 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 GUCA1CO95843 209 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 ESR1P03372 595 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 F11P03951 625 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 PTGER3P43115 390 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 PIK3CGP48736 1102 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 PIGFQ07326 219 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 PPP1R8Q12972 351 aaKnown RBP16.97■□□□□ 0.31
USB1-201ENST00000219281 SKIV2LQ15477 1246 aaKnown RBP16.97■□□□□ 0.31
USB1-201ENST00000219281 TCTN1Q2MV58 587 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 TTC23Q5W5X9 447 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 RNF19BQ6ZMZ0 732 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 DCDC5Q6ZRR9 648 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 AADATQ8N5Z0 425 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 ZNF555Q8NEP9 628 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 RAB2BQ8WUD1 216 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 SLC13A3Q8WWT9 602 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 SLC47A1Q96FL8 570 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 TBCDQ9BTW9 1192 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 ADGRE3Q9BY15 652 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 AMBRA1Q9C0C7 1298 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 IKZF5Q9H5V7 419 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 DNAJB9Q9UBS3 223 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 PSME2Q9UL46 239 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 TNPO3Q9Y5L0 923 aaKnown RBP16.97■□□□□ 0.31
USB1-201ENST00000219281 CORINQ9Y5Q5 1042 aa16.97■□□□□ 0.31
USB1-201ENST00000219281 TBC1D4O60343 1298 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 VNN2O95498 520 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 S100BP04271 92 aaPredicted RBP16.96■□□□□ 0.31
USB1-201ENST00000219281 RHOCP08134 193 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 SELPP16109 830 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 ZNF12P17014 697 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 GSTM2P28161 218 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 PIGAP37287 484 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 HSPA7P48741 367 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 SGSHP51688 502 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 KPNA1P52294 538 aaPredicted RBP16.96■□□□□ 0.31
USB1-201ENST00000219281 PLA2G16P53816 162 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 CYP4F3Q08477 520 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 TRAF3Q13114 568 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 C6orf141Q5SZD1 244 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 GALNT18Q6P9A2 607 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 RSPO2Q6UXX9 243 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms