RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 OR2B2Q9GZK3 357 aa11.98□□□□□ -0.49
TSPAN9-201ENST00000011898 ZNHIT2Q9UHR6 403 aa11.98□□□□□ -0.49
TSPAN9-201ENST00000011898 PCDHB9Q9Y5E1 797 aa11.98□□□□□ -0.49
TSPAN9-201ENST00000011898 PDPK1O15530 556 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 RGS10O43665 173 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 SH3BGRLO75368 114 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 ALDOAP04075 364 aaKnown RBP11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 PSKH1P11801 424 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 SLC1A2P43004 574 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 SLC15A1P46059 708 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 PURAQ00577 322 aaKnown RBP11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 HSPA14Q0VDF9 509 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 PCLAFQ15004 111 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 INO80DQ53TQ3 878 aaPredicted RBP11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 DENND1CQ8IV53 801 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 LEMD2Q8NC56 503 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 LILRB4Q8NHJ6 448 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 ACBD6Q9BR61 282 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 CCNB1IP1Q9NPC3 277 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 PADI3Q9ULW8 664 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 PEX16Q9Y5Y5 336 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 AHSGP02765 367 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 BMXP51813 675 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 RPL38P63173 70 aaKnown RBP11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 TAF10Q12962 218 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 SNAPC1Q16533 368 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 HIST2H2ACQ16777 129 aaPredicted RBP11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 NOMO2Q5JPE7 1267 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 TSTD2Q5T7W7 516 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 BICRALQ6AI39 1079 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 HIST2H2AA3Q6FI13 130 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 CACTIN-AS1Q8N1I8 211 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 TWIST2Q8WVJ9 160 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 IRGQQ8WZA9 623 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 LINGO1Q96FE5 620 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 ZNF486Q96H40 463 aaPredicted RBP11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 PPM1MQ96MI6 270 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 GMIPQ9P107 970 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 ZNFX1Q9P2E3 1918 aaKnown RBP11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 MOXD2PA6NHM9 499 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 EFCAB9A8MZ26 197 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 H7C2Y5 167 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 INHBCP55103 352 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 VBP1P61758 197 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 EFR3AQ14156 821 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 CCDC157Q569K6 752 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 CANT1Q8WVQ1 401 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 BTN2A3PQ96KV6 586 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 UROC1Q96N76 676 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 VRTNQ9H8Y1 702 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 BBIP1A8MTZ0 92 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 F8W810 466 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 G3V2T6 193 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 RSL1D1O76021 490 aaKnown RBP11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 STAU1O95793 577 aaKnown RBP11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 LRG1P02750 347 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 T-ENOLP0DO92 83 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 CHRNB1P11230 501 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 DGKAP23743 735 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 IL32P24001 234 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 MAZP56270 477 aaKnown RBP11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 USF2Q15853 346 aaPredicted RBP11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 ZC3HC1Q86WB0 502 aaKnown RBP11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 PLD6Q8N2A8 252 aaKnown RBP11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 CPSF7Q8N684 471 aaKnown RBP11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 TPD52L3Q96J77 140 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 KCNS3Q9BQ31 491 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 GSDMCQ9BYG8 508 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 KATNBL1Q9H079 304 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 KLHL1Q9NR64 748 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 DNMT3LQ9UJW3 386 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 IKZF3Q9UKT9 509 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 OAZ3Q9UMX2 235 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 EDARQ9UNE0 448 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 N6AMT1Q9Y5N5 214 aa11.97□□□□□ -0.49
TSPAN9-201ENST00000011898 NRP1O14786 923 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 DYRK3O43781 588 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 DLX3O60479 287 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 NPHS1O60500 1241 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 CCNYL3P0C7X3 344 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 FGF3P11487 239 aaPredicted RBP11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 EPB42P16452 691 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 RHOQP17081 205 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 ACLYP53396 1101 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 SLC10A2Q12908 348 aaPredicted RBP11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 SUZ12Q15022 739 aaKnown RBP11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 CRY1Q16526 586 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 CPSF6Q16630 551 aaKnown RBP eCLIP11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 HECTD3Q5T447 861 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 ADAMTSL2Q86TH1 951 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 TMEM132CQ8N3T6 1108 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 MYDGFQ969H8 173 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 ZNF285Q96NJ3 590 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 FERD3LQ96RJ6 166 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 REEP1Q9H902 201 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 ZDHHC2Q9UIJ5 367 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 ARL5CA6NH57 179 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 TMEM233B4DJY2 109 aa11.96□□□□□ -0.49
TSPAN9-201ENST00000011898 SLC22A1O15245 554 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms