RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Ifi202Q9R002 445 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Mecp2Q9Z2D6 484 aaKnown RBP18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 4930563M21RikA0A1L1SUT5 578 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gm14085A2AWR5 660 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Zscan4bE9Q3G0 505 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Htr4P97288 388 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Arv1Q9D0U9 266 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Ift43Q9DA69 206 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Arl3Q9WUL7 182 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rrnad1Q8BZG5 475 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Olfr1043Q8VFK4 314 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Prmt2Q9R144 448 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Tapt1Q4VBD2 564 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Fam83dQ9D7I8 585 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 LipaQ9Z0M5 397 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 UprtB1AVZ0 310 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Vmn2r72D3Z4N8 856 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Tnfaip1O70479 316 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 ChrndP02716 520 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Sult4a1P63046 284 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Dok6Q2MHE5 331 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Txnl4bQ8BUH1 149 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Sgms1Q8VCQ6 419 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Il21Q9ES17 146 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Pias4Q9JM05 507 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Eci2Q9WUR2 391 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Azin1O35484 448 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Ccdc61Q3UJV1 511 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Slc41a1Q8BJA2 512 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Oas1hQ8VI97 369 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Dyrk3Q922Y0 586 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Dnase1l1Q9D7J6 314 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Nr4a1P12813 601 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 IppkQ6P1C1 489 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Cacnb2Q8CC27 655 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Macrod1Q922B1 323 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rai2Q9QVY8 529 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Sema6cQ9WTM3 931 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Ssc5dQ8BV57 1371 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Ebf3O08791 596 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 AoahO35298 574 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Igf2bp1O88477 577 aaKnown RBP18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Ppp3caP63328 521 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Mpp1P70290 466 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Atp13a3Q5XF89 1219 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 PdprQ7TSQ8 878 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Eif5a2Q8BGY2 153 aaKnown RBP18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Cacul1Q8R0X2 377 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Taf6Q62311 678 aaKnown RBP18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Senp5Q6NXL6 749 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rasa4Q6PFQ7 802 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rpl35Q6ZWV7 123 aaKnown RBP18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Nob1Q8BW10 403 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Olfr697Q8VFM4 317 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Josd2Q9CR30 188 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 PacrglQ9D3X5 248 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Exosc1Q9DAA6 195 aaKnown RBP18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Capn6O35646 641 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Kir3dl1P83555 432 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 CrxosQ3UL53 246 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 McidasQ3UZ45 379 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Olfr859Q7TRF5 309 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Samd14Q8K070 417 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Kctd15Q8K0E1 283 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Grip1Q925T6 1127 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Ndufaf4Q9D1H6 173 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Slc4a11A2AJN7 862 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gm7951E9Q0A2 213 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gm6482F6YHC1 213 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Olfr294F7CWV4 335 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Ift52Q62559 426 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Olfr45Q8VGM1 311 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rassf1Q99MK9 340 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Decr1Q9CQ62 335 aaKnown RBP18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 9630041A04RikD3Z3U4 205 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Pmm1O35621 262 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rplp0P14869 317 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rhox4fQ2MDF8 205 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rhox4cQ2MDG1 205 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Acsbg2Q2XU92 667 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 CenplQ3U3S3 329 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Mon1aQ6PDG8 556 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Naaladl1Q7M758 745 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Tmem185bQ8R3R5 350 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rhox4aQ9D3I8 205 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Polr2jO08740 117 aaKnown RBP18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rab19P35294 217 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Cpne9Q1RLL3 553 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 MtdhQ80WJ7 579 aaKnown RBP18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Map2k7Q8CE90 535 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Acss1Q99NB1 682 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Nop16Q9CPT5 178 aaKnown RBP18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 NtsQ9D3P9 169 aa18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 FarsbQ9WUA2 589 aaKnown RBP18.18■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gemin5Q8BX17 1502 aaKnown RBP18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gm8765B7ZWJ3 1017 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gm21560D3Z7A4 205 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Vmn2r86G5E8Y4 848 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gm3138K7N754 218 aa18.17■□□□□ 0.5
Trim71-201ENSMUST00000111816 Hsd17b7O88736 334 aa18.17■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms