RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Adgrg7Q8BM96 785 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 MtapQ9CQ65 283 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 EqtnQ9D9V2 337 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Slc26a3Q9WVC8 757 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Numa1E9Q7G0 2094 aaKnown RBP11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Znf609Q8BZ47 1413 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cyp4a30bA0A087WS15 508 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Hsd17b10O08756 261 aaKnown RBP11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Hoxa10P31310 416 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cxcr5Q04683 374 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Lix1Q6P566 282 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tmc6Q7TN60 810 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 HyiQ8R1F5 277 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Zfp84Q9D654 559 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cyp2d22Q9JKY7 500 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Grm3Q9QYS2 879 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 TfgQ9Z1A1 397 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Scgb2b12S4R2L0 112 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Trip11E9Q512 1976 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Atp6ap1lD3Z5W0 336 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cntnap3E9PY62 1287 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Npr1P18293 1057 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Vcam1P29533 739 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Elmod1Q3V1U8 326 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Xkr4Q5GH67 647 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 PkdccQ5RJI4 492 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 RfflQ6ZQM0 377 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Fstl5Q8BFR2 847 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Man2a2Q8BRK9 1152 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Zfp64Q99KE8 643 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tinf2Q9QXG9 341 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm13101A2ASJ0 481 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Zscan4bE9Q3G0 505 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Slc6a6O35316 621 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Plin2P43883 425 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Orai2Q8BH10 250 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Krt33aQ8K0Y2 404 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Txndc11Q8K2W3 948 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tmem168Q91VX9 697 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Lrch4Q921G6 680 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tmbim6Q9D2C7 237 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Capn15Q9JLG8 1095 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Scgb2b17S4R2V3 82 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ulk1O70405 1051 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 GhrP16882 650 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cdh5P55284 784 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Slc25a23Q6GQS1 467 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Smco3Q8BQM7 225 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Hpf1Q8CFE2 346 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr808Q8VGI8 312 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 M6prP24668 278 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 StomP54116 284 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Msantd2Q6NZR2 559 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Znf423Q80TS5 1292 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr1052Q8VGR8 312 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Exosc1Q9DAA6 195 aaKnown RBP11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Dpysl5Q9EQF6 564 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr738L7N1X7 311 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Psmd4O35226 376 aaKnown RBP11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Smpd2O70572 419 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Grpel2O88396 224 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Art5P70352 309 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Pcdhb18Q91Y02 792 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Lrrc34Q9DAM1 415 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cdh13Q9WTR5 714 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm8369E9PZI3 166 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Serpine2Q07235 397 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ggt1Q60928 568 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tcaf2Q921K8 919 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 March2Q99M02 246 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 TrmuQ9DAT5 417 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Vmn2r57L7N269 863 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ptpn9O35239 593 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 DhfrP00375 187 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Vamp2P63044 116 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 1810049J17RikQ3V2G9 153 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 E2f5Q61502 335 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Zfp719Q8BIV1 735 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gen1Q8BMI4 908 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Frmd6Q8C0V9 622 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ankrd61Q9CQM6 421 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Rnf146Q9CZW6 359 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Alg13Q9D8C3 1166 aaKnown RBP11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Chrac1Q9JKP8 129 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Uba2Q9Z1F9 638 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Slc7a7Q9Z1K8 510 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Man1b1A2AJ15 658 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Pfdn2O70591 154 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Mup4P11590 178 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Elk4P41158 430 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Pdp1Q3UV70 538 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Slc22a16Q497L8 649 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Fndc3bQ6NWW9 1207 aaKnown RBP11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfm2Q8BM13 448 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 NifkQ91VE6 317 aaKnown RBP11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Myg1Q9JK81 380 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm4756A0A140LIS8 335 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Prkag1O54950 330 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tlx3O55144 291 aa11.79□□□□□ -0.52
Trim56-201ENSMUST00000054384 Mup3P04939 184 aa11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms