RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Pin4Q9CWW6 131 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ptges3lQ9D9A7 131 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gpr45Q9EQQ4 373 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Jam2Q9JI59 298 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Fndc1E9Q043 1732 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Robo1O89026 1612 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm8220F6YKI2 213 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Nr4a1P12813 601 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 F2P19221 618 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm8332Q3UTA4 144 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Clca4bQ3UW98 925 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ppm1hQ3UYC0 513 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Cldn11Q60771 207 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Kxd1Q80XH1 177 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ctxn3Q8BXZ0 80 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Crispld1Q8CGD2 500 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Tas1r3Q925D8 858 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Plin3Q9DBG5 437 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Kcnq4Q9JK97 696 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Prmt2Q9R144 448 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Skp1Q9WTX5 163 aa10.02□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Mllt3A2AM29 569 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Kctd18E0CZ26 429 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 KlO35082 1014 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Sult2b1O35400 338 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Tpst2O88856 376 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Cd68P31996 326 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Rps14P62264 151 aaKnown RBP10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Parp8Q3UD82 852 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Il1rapQ61730 570 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Dlx3Q64205 287 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Olfr699Q7TRN3 316 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Idh3aQ9D6R2 366 aaKnown RBP10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 EurlQ9D7G4 290 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Acox2Q9QXD1 681 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Znf638Q61464 1960 aaKnown RBP10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 TagapB2RWW0 714 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm4778L7N229 365 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Kcnn4O89109 425 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Cyp2b10P12791 500 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 AaasP58742 546 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Yes1Q04736 541 aaKnown RBP10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Xrra1Q3U3V8 786 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Zdhhc19Q810M5 347 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 TiparpQ8C1B2 657 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Tmem252Q8C353 183 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Aoc1Q8JZQ5 751 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Q9D1F3 157 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Dusp26Q9D700 211 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Kcne2Q9D808 123 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Vmn2r2L7N2E9 908 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 MtpnP62774 118 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 QrfprP83861 433 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Uts2bQ765I1 113 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ago1Q8CJG1 857 aaKnown RBP10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Pcdhb6Q91XZ4 772 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Anks3Q9CZK6 655 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Efhc2Q9D485 750 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Cables1Q9ESJ1 568 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 IvdQ9JHI5 424 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Dnajb2Q9QYI5 324 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm3149E9PW52 257 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm8362K7N6Y6 257 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm7970L7N271 213 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm7980L7N471 213 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 NsmafO35242 920 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 ShdO88834 343 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Rfx2P48379 717 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Sox2P48432 319 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Rab2aP53994 212 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 MarcoQ60754 518 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Arnt2Q61324 712 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Mcph1Q7TT79 822 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Pan2Q8BGF7 1200 aaKnown RBP10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 PstkQ8BP74 359 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ace2Q8R0I0 805 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 RhoqQ8R527 205 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 GneQ91WG8 722 aaKnown RBP10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Diras1Q91Z61 198 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ripply3Q924S9 152 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Nudt14Q9D142 222 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 SerhlQ9EPB5 311 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Nfs1Q9Z1J3 459 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm8374L7N2A9 172 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Cd70O55237 195 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Myf6P15375 242 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Nfatc3P97305 1075 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 GmpsQ3THK7 693 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 CenplQ3U3S3 329 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Bpifb1Q61114 474 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Trim24Q64127 1051 aaKnown RBP10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 EfsQ64355 560 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 A4galtQ67BJ4 359 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Man1c1Q6NXK9 625 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Olfr412Q7TRW7 312 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Olfr213Q7TS32 327 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Q8BHN7 327 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Fzd10Q8BKG4 582 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Apbb2Q9DBR4 760 aa10.01□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Akirin2B1AXD8 201 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms