RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Fem1cQ8CEF1 617 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Pitrm1Q8K411 1036 aaKnown RBP15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Tmem98Q91X86 226 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Q922M7 232 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Snrnp48Q9D361 337 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Gipc2Q9Z2H7 314 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Tanc1Q0VGY8 1856 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Obox5G3X9P6 291 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Vmn2r54K7N649 806 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 NagluO88325 739 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Kcnn4O89109 425 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Fam171bQ14CH0 825 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Fgfr3Q61851 801 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Ca4Q64444 305 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Mon1aQ6PDG8 556 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Capn8Q91VA3 703 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Pcdhga11Q91XY8 933 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 NlnQ91YP2 704 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Scd3Q99PL7 359 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Bbs2Q9CWF6 721 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 PgdQ9DCD0 483 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Nmnat1Q9EPA7 285 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Gria3Q9Z2W9 888 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 RttnQ8R4Y8 2226 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Smim17A0A504 109 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Armc4B2RY50 1037 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Gm4847G3X946 537 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Emp3O35912 163 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Btnl2O70355 454 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Hcn1O88704 910 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Esr1P19785 599 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Tmc5Q32NZ6 967 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Abraxas2Q3TCJ1 415 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Hephl1Q3V1H3 1159 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cpa6Q5U901 438 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Slc6a3Q61327 619 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Vsx2Q61412 361 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Abcg1Q64343 666 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cpsf6Q6NVF9 551 aaKnown RBP15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Thoc7Q7TMY4 204 aaKnown RBP15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Ldhal6bQ8BVP2 382 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Imp4Q8VHZ7 291 aaKnown RBP15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Far1Q922J9 515 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cryl1Q99KP3 319 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Dctn3Q9Z0Y1 186 aa15.98■□□□□ 0.15
Trim28-201ENSMUST00000005705 Oas1eA0A0J9YV76 386 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cylc1A0A1B0GR13 642 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Gm13040A2A8C4 496 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Gm13101A2ASJ0 481 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Gm13119B1ARV5 481 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Eif2b3B1AUN2 452 aaKnown RBP15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Gm10715J3QP74 227 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Pxmp2P42925 194 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Polr3bP59470 1133 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 NficP70255 439 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cdk15Q3V3A1 433 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Krtcap2Q5RL79 136 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Sf1Q64213 653 aaKnown RBP15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cdc14bQ6PFY9 485 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Ubp1Q811S7 540 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Elmo1Q8BPU7 727 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Ifi44Q8BV66 422 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 ZwilchQ8R060 589 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Vmn1r18Q8R2C8 299 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Olfr1353Q8VGU8 309 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Atp6v1c2Q99L60 427 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Mfsd10Q9D2V8 456 aaKnown RBP15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Efcab1Q9D3N2 212 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 4933425L06RikQ9D3Z8 585 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Hcar2Q9EP66 360 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Pik3cgQ9JHG7 1102 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Rpl38Q9JJI8 70 aaKnown RBP15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Polr2jO08740 117 aaKnown RBP15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Kpna6O35345 536 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Tnfsf4P43488 198 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Tuba1cP68373 449 aaKnown RBP15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Mdga1Q0PMG2 940 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Gpr165Q3V3A3 455 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Kcna5Q61762 602 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Gucy1b2Q8BXH3 824 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Lurap1lQ8K2P1 221 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Trib2Q8K4K3 343 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Olfr348Q8VGK3 313 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Pcdhb17Q91VD8 799 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Zfp65Q91W94 390 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 DdoQ922Z0 341 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Akirin1Q99LF1 191 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Cyp3a44Q9EQW4 504 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Tuba8Q9JJZ2 449 aa15.97■□□□□ 0.15
Trim28-201ENSMUST00000005705 Itga8A2ARA8 1062 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Ankrd16A2AS55 361 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Olfr376E9Q4M1 320 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Fam181aJ3QNB7 292 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Gp5O08742 567 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Spp1P10923 294 aaKnown RBP15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 ThrbP37242 461 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Nat3P50296 290 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Serpina5P70458 405 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Olfr616Q3KPB0 317 aa15.96■□□□□ 0.15
Trim28-201ENSMUST00000005705 Clec12aQ504P2 267 aa15.96■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms